Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2206 ATGTATTCAGCTTTTGCAACTCTGAATGTCAGTGTCGATATAGTTAGCAATGGAGTTGGCAGAAAAAGGAGTTCTGGTTTCTGGGGTGAAAGTACAAGGGGGAGTTTGAACAGCAGATTTTGTAGTATTAAACCATGCAGGAGTTTAAACACTAGAAACTTCAAGAATGGCATTGCATATGCTGTTTACGCACCAGACATGAACAAAGAGACTACTGTGGCATTCCCAGGACTCGTTTTCCAGAGTCCAAGAGCAAATCCAGATAATGTAGCTGCCATCATATTGGGTGGAGGTGCTGGAACTCGGCTCTTTCCTCTAACTAGCACAAGAGCCAAGCCCGCTGTTCCAATTGGAGGGTGTTACAGACTCATAGATATTCCTATGAGCAATTGCATCAACAGTGGCATCAGAAAAGTGTATGTTTTAACACAGTTCAACTCTTTCTCCCTCAATGGCCACTTGTCTCGAACATATAATTTTGGAAATGGTGTGAACTTTGGGGATGGCTTTGTGGAGGTCTTGGCTGCTACTCAAACTCCTGGAGAAGCAGGTAACAAATGGTTTCAAGGGACAGCTGATGCAGTGAGGAGATTTATATGGGTTTTTGAGGATGCCAAACACAAGAATATTGAGCATATATTGATACTTTCTGGCGATCATCTTTGTCGGATGGACTATATGAAGATTTTGGAGAAACATATTGGAACAAATGCTGATATCACGGTTTCATGTGTACCAATGGACGAAAGCCGTGCATCAGATTATGAGCTGGTGAAAATTGAGAGAAATGGAAGGATTACACAGTTTGCAGATAAACCAAAGGGATCAGATTTGAAGGCAATGCATGTGGACACCACTCTCCTAGGATTACCACCAGAAGAAGCAACGGAATATCCTTACATTGCATCCATGGGAGTTTATGTATTTAGAACTGAGGTTCTTCTGAAACTACTAAGATGGAGCTGTCCTTCATGTAATGACTTTGGATCCGAATTAATTCCATCTGCAGTGAGGGAGCACAAAGTCCAAGCATATTTGTTCAGGGACTATTGGGAAGATATAGGAACTATAAAGTCCTTCTTTGATGCAAATCTGGCCCTAACAGAACAGCCTCCAAAATTTGAATTCTATGATCCAAAGACCCCTTTCTTTACCTCCCCAAGGTACCTACCACCCACTAAAGTGGTAAAAAGCAAGATTGTAGATGCAATCATTTCTCATGGTTGCTTCTTGAGTGAGTGTAGTGTTCAACATTCTGTTGTTGGTGTGCGGTCGCGGCTAGCATCCGGTGCAGTGCTTCAGGCAAGCGATACCATGATGATGGGGGCTGACTACTATCAAACTGATTCTGAAATTGAATCGCTTCTGGCACAAGGAAAGGTTCCAGTTGGTGTTGGAGAGAATACCAAAATCAGGAATTGTATAATTGACAAGAATGCCAAGATAGGAAGAAATGTGATTATTGCAAATGGTGATGGTGTTCAAGAAGCAGACAGGCCTATGGAAGGATTTTACATTAGGTCTGGCATCATAGTTATAGTGAAGAATGCAACAATTAAAGATGGAACAGTTATCTGA 1578 0.4183 MYSAFATLNVSVDIVSNGVGRKRSSGFWGESTRGSLNSRFCSIKPCRSLNTRNFKNGIAYAVYAPDMNKETTVAFPGLVFQSPRANPDNVAAIILGGGAGTRLFPLTSTRAKPAVPIGGCYRLIDIPMSNCINSGIRKVYVLTQFNSFSLNGHLSRTYNFGNGVNFGDGFVEVLAATQTPGEAGNKWFQGTADAVRRFIWVFEDAKHKNIEHILILSGDHLCRMDYMKILEKHIGTNADITVSCVPMDESRASDYELVKIERNGRITQFADKPKGSDLKAMHVDTTLLGLPPEEATEYPYIASMGVYVFRTEVLLKLLRWSCPSCNDFGSELIPSAVREHKVQAYLFRDYWEDIGTIKSFFDANLALTEQPPKFEFYDPKTPFFTSPRYLPPTKVVKSKIVDAIISHGCFLSECSVQHSVVGVRSRLASGAVLQASDTMMMGADYYQTDSEIESLLAQGKVPVGVGENTKIRNCIIDKNAKIGRNVIIANGDGVQEADRPMEGFYIRSGIIVIVKNATIKDGTVI* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2206 525 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 13 525 - -
Dod08g2206 525 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 302 312 IPR005836 GO:0005978|GO:0008878
Dod08g2206 525 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 187 195 IPR005836 GO:0005978|GO:0008878
Dod08g2206 525 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 80 388 IPR029044 -
Dod08g2206 525 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 90 489 IPR011831 GO:0005978|GO:0008878
Dod08g2206 525 SUPERFAMILY Trimeric LpxA-like enzymes 385 525 IPR011004 -
Dod08g2206 525 Gene3D Hexapeptide repeat proteins 389 525 - -
Dod08g2206 525 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 96 115 IPR005836 GO:0005978|GO:0008878
Dod08g2206 525 SUPERFAMILY Nucleotide-diphospho-sugar transferases 89 486 IPR029044 -
Dod08g2206 525 CDD LbH_G1P_AT_C 391 519 - -
Dod08g2206 525 CDD ADP_Glucose_PP 92 354 - -
Dod08g2206 525 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 13 525 IPR011831 GO:0005978|GO:0008878
Dod08g2206 525 Pfam Nucleotidyl transferase 92 369 IPR005835 GO:0009058|GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2206 Dod-Chr8 49764443 49769659 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2206 08 49764443 49769659 Dod08g2206 08 49764443 49769659 ECH