Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2192 ATGAGTTGGAGAGCTTTACTCTCCAGACACAAAAAACTCACCAAACTCACTCCAATTTTTCAATTTTCCCAAAATGCCCCTACCCTCCCCACACTCCAACAACCACTTCCCATTCCCCTGTTCACCAGAAAAAGGCACCTTCATAATCACTCCCACCGGGTCACCCAACTCAGTAACTCGCTCATACCTTCAAAACCCGACACAAGCGACGAAGAAGATTCCGACGACACGATGAACGAGTTCTTGTCCCGATTCGTGTGGGTGATGCGGAAGAAGGTCCGAGAATCGTACCCTGATTCTGACAAGGGCACGGTCGACGCAATGCTCGTGGTGATCGTGGAACGCGTCGTTTCGGAGCTCGAGAAGGGCGGGTTCGTCGTTGGAACGGCGCCGTATTCGTCTGGTTCGGATGATTTCAGCGGGGATCTGTGGAGGACGGTGTGGGAGGTGAGCCAGACGGTGATCGAAGGGATGAACAAGGAGAGGAAGAAGGAGAAGATGAAGGGTTTCTTGCAGTGCGAGGAGGTCAAGCAAATGTGCAGGTTTGCTGGCGAGGTTGGGATAAGAGGGGACATGCTCAGGGAGCTGAGATTCAAGTGGGCACGAGAGAAGATGGAAGAGCATGAGTTCTATGAGGGTTTAGAGCGTCTAAGGAAAGAAGAAGAAGCTGAAGAAAATGATGAAGAAAAGCAACGGGGGACAGAACATGGGGATGCTGGTGTTGGTGTTAGTGAGGAGGGGGATAAGGTTGTTGGGCTTCCCAAGAGGAAGGGGAAGATAAGGTACAGAATTTATGGGCTTGATTTGTCTGATCCCAAGTGGGCGACTGCGGCTGATAGGATCCATGAGGCGGGGCAGGTCATGTGGCCAAAGGAGGTGAAGCCGATAACCGGGAAGTGTAAGGTTGTTACGGAGCGGATTTTGGGGTTGAAGGAGGAGGATAGTGATGAGTTGTTGGGGCTTTCGGCTGAGTGGGTGGAGCTTCTGCAACCCAACAGGGTTGATTGGATGAGCTTGCTTGACAGATTGAAACAGCAGAATCCTCCTTTGTACTTCAAGGTGGCAGAAATTGTATTGACTGAAGATTCTTTCCAAACAAGTATATCTGACTACTCCAGGCTTATTGATATCTATGCTAAAGAGAATAAGTTTGATGATGCTGAGAGGATCCTTATGAAGATGAACAAAAAAGGAATGCTACCAGATGCTTCAGCAGCCAGTGCATTGGTCCACATGTACAGCAAGGTAGGAAATCTTGATCGCGCAAAAGAAGCATTTGAAATCTTGAGGAGCCAGGGCTTCCAACCAGACATAAAAGTCTACACTGCAATGATCATGGCCCATGTAAATGCCGGTGATCCTAAGAAAGGTGAGGCTCTGATGAGGGAGATGGAGATGAGAGATATTAAACCCACAAAGGAGATATACATGGCATTGCTGCAATCTTTTTCTCAATGTGCTGATGTTGCTGGAGCCGGACGAATTTCAACAACTATGCAGTTTGCAGGATTCCCGCAGACTATGGAGACATGCACATTACTTGTTGAGGCACATGCAAATGCAGGTGAACCAGATCAGGCAAGAAGCAACTTTGACTACATGGCAAACTTTGGGCATAAGCCTGATGATAGGTGCACTGCTAGCATGATTGCGGCCTATGAGAAGAAAAACTTATTGGACAAGGCACTAAACCTTCTTTTGGACCTAGAGAAGGATGGGTTTGAGCCTGGGGTTGCGACTAACTCTGTTCTTGTGGATTGGTTGGGTAGGTTGCAGCTCGTTGACGAGGCTGAACAGATTCTAGGCAAAATCGCTTTGCAAGGCGAGGCTCCTCCTTTTAAGGTTCAAGTGAGTCTTTGCGATATGTATGCGAGGGCTGGAATCGAGAAAAAGGCCCTTCAAACTCTGGGCCTTCTGGAAGCTAGGAAGGATGAATTGGGACATGCTGATTTTGAGAGAATCATACAAAGCCTTATTGCTGGTGGGTTTGAGCAGGATGCAAGAAGAATGTGTGGGGTCATGGAGGCACAGGGTTTCACTCCATCAGAACCCCTTAAGATGGCACTTATGAAACCTAGCCGCAAATCACCAAGTATGAGATAG 2103 0.4831 MSWRALLSRHKKLTKLTPIFQFSQNAPTLPTLQQPLPIPLFTRKRHLHNHSHRVTQLSNSLIPSKPDTSDEEDSDDTMNEFLSRFVWVMRKKVRESYPDSDKGTVDAMLVVIVERVVSELEKGGFVVGTAPYSSGSDDFSGDLWRTVWEVSQTVIEGMNKERKKEKMKGFLQCEEVKQMCRFAGEVGIRGDMLRELRFKWAREKMEEHEFYEGLERLRKEEEAEENDEEKQRGTEHGDAGVGVSEEGDKVVGLPKRKGKIRYRIYGLDLSDPKWATAADRIHEAGQVMWPKEVKPITGKCKVVTERILGLKEEDSDELLGLSAEWVELLQPNRVDWMSLLDRLKQQNPPLYFKVAEIVLTEDSFQTSISDYSRLIDIYAKENKFDDAERILMKMNKKGMLPDASAASALVHMYSKVGNLDRAKEAFEILRSQGFQPDIKVYTAMIMAHVNAGDPKKGEALMREMEMRDIKPTKEIYMALLQSFSQCADVAGAGRISTTMQFAGFPQTMETCTLLVEAHANAGEPDQARSNFDYMANFGHKPDDRCTASMIAAYEKKNLLDKALNLLLDLEKDGFEPGVATNSVLVDWLGRLQLVDEAEQILGKIALQGEAPPFKVQVSLCDMYARAGIEKKALQTLGLLEARKDELGHADFERIIQSLIAGGFEQDARRMCGVMEAQGFTPSEPLKMALMKPSRKSPSMR* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2192 700 Pfam Pentatricopeptide repeat domain 361 413 IPR002885 -
Dod08g2192 700 Coils Coil 211 234 - -
Dod08g2192 700 MobiDBLite consensus disorder prediction 216 246 - -
Dod08g2192 700 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 507 541 IPR002885 -
Dod08g2192 700 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 542 576 IPR002885 -
Dod08g2192 700 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 5, MITOCHONDRIAL 33 691 - -
Dod08g2192 700 MobiDBLite consensus disorder prediction 55 76 - -
Dod08g2192 700 Gene3D Tetratricopeptide repeat domain 468 696 IPR011990 GO:0005515
Dod08g2192 700 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 437 471 IPR002885 -
Dod08g2192 700 Pfam Pentacotripeptide-repeat region of PRORP 419 527 IPR033443 -
Dod08g2192 700 Gene3D Tetratricopeptide repeat domain 311 467 IPR011990 GO:0005515
Dod08g2192 700 TIGRFAM PPR: pentatricopeptide repeat domain 440 472 IPR002885 -
Dod08g2192 700 TIGRFAM PPR: pentatricopeptide repeat domain 407 438 IPR002885 -
Dod08g2192 700 TIGRFAM PPR: pentatricopeptide repeat domain 371 403 IPR002885 -
Dod08g2192 700 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 402 436 IPR002885 -
Dod08g2192 700 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 367 401 IPR002885 -
Dod08g2192 700 PANTHER OS07G0661900 PROTEIN 33 691 IPR044657 -
Dod08g2192 700 Pfam PPR repeat 548 574 IPR002885 -
Dod08g2192 700 SUPERFAMILY TPR-like 297 546 IPR011990 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2192 08 49646638 49650798 Dod08g2192 08 49646638 49650798 ECH