Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2187 ATGACTGTCAACAACCCTGCCACTGACCAAGGCGGCACGGCCGCCACTGCCGCCTCTGCCGCCGTTCAGATCCAGCAGCGTACTAGAAGAGTGCTCCCGGATTTCCTCCAGAGTGTCAATCTCAAGTATGTCAAACTCGGTTACCACTACCTGATCACCAATCTCTTCACCTTATGCTTAGTGCCCTTGATCATTGTCACCTTAATTCAAGTCTCCCAAACAGACCTCAATGATCTCCACCATGTGTGGCTCCATCTGCAGTACAACCTCCTCACTGTCCTATCTTGCTCTGCCTTCCTCGTCTTCGGCCTCACCCTCTTCATTCTCACTCGCCCTCGCCCTGTCTACCTTGTTGACTTTTCTTGTTTTCGCCCCGCCGACCGCTTCAAGGCCCCCTTTCATAGCTTCATGGAGCACTCTCGCCTCACCGGGGACTTTGACGAGTCCTCCCTCGAGTTCCAGCGCAAGATTCTCTTGCGCTCGGGACTTGGGGAGGAAACGTATGTCCCCGAGGCGATGCATTTTATACCTCCTCGGCCTTCTATGGCTGCGGCCAGAGCCGAGGCCGAGGAGGTTATGTTTGGTGCATTGGATAGTCTCTTCCAGAACACCGGCCTTAAGCCTAAGGATGTTGGCATTCTTGTGGTGAATTGTAGTTTGTTTAACCCCACGCCGTCGTTATCTGCAATGATTGTTAACAAGTATAGGTTGAGGGGTAACATTAGGAGCTTTAATTTGGGGGGAATGGGGTGTAGCGCTGGGGTTATAGCTGTTGATCTTGCCAAGGACATGTTGCAGGTTCATAGGAATACTTATGCTGTTGTTGTTAGCACTGAGAACATTACTCAGAATTGGTACTTTGGGAACAAAAAATCCATGCTCATACCCAATTGCTTGTTTCGTGTTGGGTGTTCTGCTGTGCTGCTCTCCAATAAGTCTGCTGATAGGAGGAGGGCAAAGTACAGGCTTCTTCATGTCATGAGGACGCATCGCGGGGCCGATGACAAGGCTTTCCGGTGTGTTTATCAGGAGCAGGATGATGCTGGAAAGACTGGTGTTTCCTTGTCTAAGGATTTGATGGCAATCGCTGGCGGGGCGCTTAAGACCAACATCACCACCCTTGGCCCTCTGGTGCTCCCAATTAGTGAGCAGCTTCTGTTTTTTGCTACTTTGTTGATGAGCAAGTTGTTCAAGGCTAAGGTGAAGCCTTATATACCGGACTTCAAGCTTGCGTTTGATCATTTTTGCATACATGCTGGGGGCAGGGCGGTGATTGATGAGTTGGAGAAGAACCTCCAATTGCTTCCTGTGCATGTTGAGGCTTCTAGGATGACCCTTCACAGGTTTGGGAACACCTCATCAAGCTCCATTTGGTATGAGTTGGCATATATGGAAGCAAAAGGGAGGATGAGAAGGGGCAACAGGGTTTGGCAAATTGCATTTGGAAGTGGTTTTAAGTGTAATAGTGCAGTATGGGAGGCGCTTCGTAGTGTGAGGCCATCTCCTAATGGACCCTGGGAAGATTGCATTGATAAGTATCCTGTGGAAATACCCTCATAG 1560 0.4981 MTVNNPATDQGGTAATAASAAVQIQQRTRRVLPDFLQSVNLKYVKLGYHYLITNLFTLCLVPLIIVTLIQVSQTDLNDLHHVWLHLQYNLLTVLSCSAFLVFGLTLFILTRPRPVYLVDFSCFRPADRFKAPFHSFMEHSRLTGDFDESSLEFQRKILLRSGLGEETYVPEAMHFIPPRPSMAAARAEAEEVMFGALDSLFQNTGLKPKDVGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKSADRRRAKYRLLHVMRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFATLLMSKLFKAKVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYMEAKGRMRRGNRVWQIAFGSGFKCNSAVWEALRSVRPSPNGPWEDCIDKYPVEIPS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2187 519 CDD CHS_like 97 492 - -
Dod08g2187 519 Pfam FAE1/Type III polyketide synthase-like protein 109 395 IPR013601 GO:0006633|GO:0016020|GO:0016747
Dod08g2187 519 SUPERFAMILY Thiolase-like 324 493 IPR016039 GO:0016746
Dod08g2187 519 PANTHER 3-KETOACYL-COA SYNTHASE 4 22 517 - -
Dod08g2187 519 PIRSF Very_long_ch_3-ktacl-CoA_syn 34 519 IPR012392 GO:0006633|GO:0016020|GO:0016747
Dod08g2187 519 PANTHER 3-KETOACYL-COA SYNTHASE 22 517 IPR012392 GO:0006633|GO:0016020|GO:0016747
Dod08g2187 519 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 412 493 IPR013747 -
Dod08g2187 519 Gene3D - 143 494 IPR016039 GO:0016746
Dod08g2187 519 SUPERFAMILY Thiolase-like 101 319 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2187 Dod-Chr8 49614286 49616717 Dispersed/Wgd