Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2179 ATGGGTAATGATCAATCAGAGGAAAAGGAAGAAAAAGAGGAGGGTGAAGAAGAAGAGTTGGAAGCTAAAGAAGAAGGGTTGGATGGTGATGATGGTGGCAGCAACGGTGGTTTAGCTGAATCTGTGGATCAGGATTCTGAGGTTTTGGAAGATGGAGGTGCAGATGTGGAGGAACAAAAACCAAGCAAGGGAAAGGTGAAAGGGCCATTGTTTGATCCAAATGCTAGCTATAGGTGGAAATTGTGTAGCACTAGGAGCAAGCATAACTACATTCCTTGTATTGATATTGAAGTTGGTGGTGGAAGGGTTCAGAGTTACCGGCATAAGGAGAGGAGTTGCCCAAGGGCACCAGTGGTGTGTCTGGTTCCTCTTCCTCATGGAGGATATGGGTATCCAGTGCCTTGGCCTGAGAGCAAATCGAAGATATTGTATAAAAATGTTGCACACCCCAAACTAGCTGTTTACATGAAAAGGCATAGCTGGTTGATGGAGTCTGGAGAGTATCTAACTTTCCCCCAAAACCAGTCTGAGTTCAAGGGTGGGATTCAACATTATCTTGAGTCCATTGAAGAGATGGTACCAGACATTGAGTGGGGAAAAAATATTCGTATTGTCCTGGACATTGGATGTTCGGATTCAAGCTTTGCAGCCACGCTTCTTGATAAAGAGGTTTTAACTTTGTCACTGGGCTTGAAGGATGACCTAGTGGACTTGGCTCAGGTGGCACTTGAGCGTGGTTTTCCTGCAGTAGTTAGCCCTTTTGGTAGAAGGAGGCTTCCTTTTCCAAGTCAAGTTTTTGATGCTATTCATTGTGGGGGTTGCAGCATAGCTTGGCATTCCAATGGGGGTAAGCTTCTGTTAGAGATGAATCGGATTCTAAGACCTGGTGGATACTTTATTATGTCAACTAAACATGGCAGCACTGAAGGAGAAGAAGCCATGACCACGTTGACTGCATCTATTTGTTGGAATGTTCTGGCACATAAAAGTGATGATGTTGGTGAAGTTGGAGTTAAAATATATCAAAAGCCGGAAGGAAATGATATATACGAATTGAGGAGGAAGAAAATTCCACCACTATGCAAAGAGAATGAAAAACCTGATGCAGCCTGGTATGTTCCAATGAAGACTTGTTTGCACACCATTCCAATTGGGATCGAACAACATGGCGCAGAGTGGCCTGATGAATGGCCCAAGAGGCTCGAATCTTATCCTGATTGGGTGAGCAATAAAGAGAAAGTGGTTGCAGACACCAACCACTGGAATGCTATTTTTAACAAGTCCTACCACAATGGAATGGGCATTAACTGGTCTAATATCCGTAATGTGATGGACATGAAAGCCATCTTTGGAGGATTTGCTGCCGCTCTCTCTCAGTCTCAACAGAAGGCCTGGGTGATGAATGTAGTACCCTTTCACGCACCAGACACACTTCCCATCATTTTTGAACGTGGGCTTGTTGGTGTTTATCACGATTGGTGTGAGTCATTTGGAACTTACCCAAGAACATATGACCTTTTGCATGCTGATCATTTATTCTCACGGCTCAAAAACAGGTGCAAGCAAACTGTATCCATTGTTGTTGAGATGGACCGTATGTTGAGACCTGGAGGTTGGACCATCATACGTGACAAAGTTGATATTCTAAATCCATTGGAGGAAATACTCAGAAGTATGCAGTGGGAAATCAGAATGACTTTTGCTCAGGACAAGGAGGGTATCTTATCACACCGCCTCCACTCCCTCCTCGCCTCAAACGGCGTCGTTTTGGACCTCCTCGACGCTCAAAACTACGAGCCCGAAGACCTACCCAAAGAAAGCCTCGTCATCCTCGTGGCTTCCACGTGGGAGAACGGAGCACCACCTCCCGGAGCACGGTTTTTCGCCACGTGGCTCGCGGAGAGTGCTAAGGACTTTAGGGTCGGGTCGCTGGTTCTCTCGAATTGCAAATTCGCGGTGTTTGGTGTGGGGAGTAGGGTTTATGGAGATAGCTTCAATGCGGTGGCGAGGGGTTTTGTGAAGCAGATGAGGGATTTGGGAGGGAAGGAAGTGGTTCCTTTGGGGGAAGGTGATGTTAATGGTGGTGGAGGAGGGGATTTGGATTTGGAATTTGAGAAGTGGTGTGGGAAGGTGGTTGGGGTTTTGAAAGGTAGGATTTTGGAAAATGGTGGTGAAGGAGGGGAGTGTGGGGTTTATGATTCTGAGGAGGAATCTGAGGGAGAGAGTGATGTGGCAGAAGAAGAAGAAGAAGGGGAGGTTATTGTTGATCTTGAGGACATTGCTGGGAAAGCGCCGTCGAGGAAGACGGCGGCTAAGGTGAAGTTGGCGGCACAGAGTAACGGGAATTTGGATGGCAAAAGAGAAATGGTGACGCCGGTCATTAGAGCAAATTTAGAGAAGCAGGGGTATAAAATTATTGGTTCGCATAGCGGTGTTAAGATTTGTAGGTGGACTAAGTCACAGCTTCGAGGCCGAGGTGGTTGCTACAAGCACTCATTTTATGGAATCGAGAGTCATAGGTGCATGGAAGCAACCCCTAGCTTGGCATGTGCAAATAAATGTGTTTTCTGCTGGAGGCATCACACAAATCCAGTAGGGAGAAGTTGGCAGTGGAAGATGGATGATCCAACAGAGATTGTAAATTCTGCAATAGACCTGCATACAAATATGATTAAACAAATGAAAGGAGTTCCTGGAGTCACCTTGGAGCGATTAAATGAAGGTCTGTCACCACGTCATTGTGCATTATCTCTTGTTGGGGAACCTATTATGTATCCAGAGATAAATGTACTTGTGGATGAGCTGCACAAAAGGAGGATTTCCACTTTTCTGTTATATGTCAGCGTAGATGCTGCAACAAAAGAATCTTTGAAGGCAATCGATAGGCCACTCTTTGGAGATTTTTGGGAGCGATTCATCGATTCCTTGACTGGTCTAAAAGAGAAACATCAGCGAACCGTATACCGCCTGACCCTGGTGAAAGGTTGGAATACTGAAGATGTTGATGCTTATTCTAAGCTCTTTAGTATAGGAGAACCTGACTTCGTTGAAATAAAAGGAGTTACATATTGCGGCTCGTCTGCAACATCAAAATTGACAATGGAAAATGTCCCTTGGCATGCCGATGTGAAAGCTTTTTCAGAGGCCCTGGCTCTTAAAAGCCAAGGGGAGTATGAAGTCGCATGTGAACATGTTCACTCGTGTTGTGTTCTCTTAGCAAAAACTAAGAAGTTCAAGATTGACGGTCAATGGAATACATGGATAGACTATGAGAAATTTCATGACCTGGTGGCTTCTGGAAGAACTTTTGACAGCAGTGATTACATGGCTGCCACACCATCTTGGGCCATTTATGGAGCAGAGGAAGGTGGATTTGATCCCGGACATACAAGATATAGGAAAGAAAGACATCATAAATCAAGTCGCAACCAATCAGGTTAG 3441 0.4525 MGNDQSEEKEEKEEGEEEELEAKEEGLDGDDGGSNGGLAESVDQDSEVLEDGGADVEEQKPSKGKVKGPLFDPNASYRWKLCSTRSKHNYIPCIDIEVGGGRVQSYRHKERSCPRAPVVCLVPLPHGGYGYPVPWPESKSKILYKNVAHPKLAVYMKRHSWLMESGEYLTFPQNQSEFKGGIQHYLESIEEMVPDIEWGKNIRIVLDIGCSDSSFAATLLDKEVLTLSLGLKDDLVDLAQVALERGFPAVVSPFGRRRLPFPSQVFDAIHCGGCSIAWHSNGGKLLLEMNRILRPGGYFIMSTKHGSTEGEEAMTTLTASICWNVLAHKSDDVGEVGVKIYQKPEGNDIYELRRKKIPPLCKENEKPDAAWYVPMKTCLHTIPIGIEQHGAEWPDEWPKRLESYPDWVSNKEKVVADTNHWNAIFNKSYHNGMGINWSNIRNVMDMKAIFGGFAAALSQSQQKAWVMNVVPFHAPDTLPIIFERGLVGVYHDWCESFGTYPRTYDLLHADHLFSRLKNRCKQTVSIVVEMDRMLRPGGWTIIRDKVDILNPLEEILRSMQWEIRMTFAQDKEGILSHRLHSLLASNGVVLDLLDAQNYEPEDLPKESLVILVASTWENGAPPPGARFFATWLAESAKDFRVGSLVLSNCKFAVFGVGSRVYGDSFNAVARGFVKQMRDLGGKEVVPLGEGDVNGGGGGDLDLEFEKWCGKVVGVLKGRILENGGEGGECGVYDSEEESEGESDVAEEEEEGEVIVDLEDIAGKAPSRKTAAKVKLAAQSNGNLDGKREMVTPVIRANLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGRSWQWKMDDPTEIVNSAIDLHTNMIKQMKGVPGVTLERLNEGLSPRHCALSLVGEPIMYPEINVLVDELHKRRISTFLLYVSVDAATKESLKAIDRPLFGDFWERFIDSLTGLKEKHQRTVYRLTLVKGWNTEDVDAYSKLFSIGEPDFVEIKGVTYCGSSATSKLTMENVPWHADVKAFSEALALKSQGEYEVACEHVHSCCVLLAKTKKFKIDGQWNTWIDYEKFHDLVASGRTFDSSDYMAATPSWAIYGAEEGGFDPGHTRYRKERHHKSSRNQSG* 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2179 1146 Pfam Radical SAM superfamily 846 1006 IPR007197 GO:0003824|GO:0051536
Dod08g2179 1146 SUPERFAMILY Flavoproteins 577 715 IPR029039 -
Dod08g2179 1146 PANTHER METHYLTRANSFERASE PMT28-RELATED 9 578 - -
Dod08g2179 1146 MobiDBLite consensus disorder prediction 1 69 - -
Dod08g2179 1146 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 437 580 IPR029063 -
Dod08g2179 1146 MobiDBLite consensus disorder prediction 9 26 - -
Dod08g2179 1146 PRINTS Flavodoxin signature 673 692 IPR001094 GO:0010181
Dod08g2179 1146 PRINTS Flavodoxin signature 610 621 IPR001094 GO:0010181
Dod08g2179 1146 PRINTS Flavodoxin signature 648 658 IPR001094 GO:0010181
Dod08g2179 1146 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 9 578 IPR004159 GO:0008168
Dod08g2179 1146 Pfam Wyosine base formation 1011 1074 IPR013917 -
Dod08g2179 1146 ProSiteProfiles Flavodoxin-like domain profile. 561 712 IPR008254 GO:0010181
Dod08g2179 1146 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 89 571 IPR004159 GO:0008168
Dod08g2179 1146 Gene3D Aldolase class I 945 1087 IPR013785 -
Dod08g2179 1146 Gene3D Aldolase class I 773 944 IPR013785 -
Dod08g2179 1146 MobiDBLite consensus disorder prediction 730 749 - -
Dod08g2179 1146 Gene3D - 573 721 IPR029039 -
Dod08g2179 1146 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 307 IPR029063 -
Dod08g2179 1146 Gene3D Vaccinia Virus protein VP39 167 343 IPR029063 -
Dod08g2179 1146 SUPERFAMILY Radical SAM enzymes 847 1008 - -
Dod08g2179 1146 Coils Coil 3 26 - -
Dod08g2179 1146 Pfam Flavodoxin 577 707 IPR008254 GO:0010181
Dod08g2179 1146 CDD AdoMet_MTases 205 302 - -
Dod08g2179 1146 SFLD tRNA wybutosine-synthesizing 786 1078 IPR034556 GO:0008033|GO:0051539
Dod08g2179 1146 SFLD tRNA wybutosine-synthesizing 786 1078 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2179 Dod-Chr8 49519393 49567615 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2179 08 49519393 49567615 Dod08g2179 08 49519393 49567615 ECH