Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2172 ATGGCAATATGGGGATCTTGCTCTGCAAAATTTCTACCTTTGCTTGCTCTCTTTCTCGCATTCAACCCTGCAAATTGTGAACCGTTCATAGGGGTGAACTATGGCCAAGTCGCCGACAACCTTCCACCGCCGTCAACCACCGCGAAACTGCTCCAATCAACGTCCATCGGAAAAGTCCGGTTATACGGATCCGACCCGGCAATAATTAAAGCTCTAGCTAACACCGGAATAGGAATCGTGATCGGAGCTGCAAACGGCGACATCCCATCACTGGCCTCGGACCCAAACTTCGCAAAAAACTGGGTCAGCACCAACGTCATCCCTTACTACCCAGCCAGCAACATCATCCTCATAACCGTCGGGAACGAGGTCATAACCTCCAACGACCCAAACCTCATGTCCCAGATGCTCCCCGCCATCCAGAATGTCCAAAATGCCCTCGACGCCGCCTCCCTCGGCGGCAAGGTCAAGGTCTCAACGGTCCATTCAATGGCCGTTCTGCGAGACTCGGAGCCCCCTTCAGCTGGGAGGTTCCACCCCGAATACGACACCGTTTTGCAGGGGCTGTTGTCGTTTAACAACGGGACGGGTTCGCCGTTTGCTATAAACCCGTACCCTTACTTTGCTTATAGGGATGACCCTGGCCGAGCTGATAACTTGGCGTTTTGCCTCTTTCAGCCTAACGCCGGAAGAGTTGACCCCAACACCAATATCAAGTACATGAACATGTTCGATGCTCAGGTGGATGCTGTGCGTTCTGCGTTGGATTCAATGGGGTTTAAGAATGTGGAGATTGTGGTTGCGGAAACAGGGTGGCCATACAAAGGAGATAGCAATGAGGTTGGTCCAAGCCTTGAGAATGCCAAGGCTTACAATGGCAATCTGATTGCACACCTGCGATCCATGGTTGGGACCCCACTGATGCCTGGGAAATCAGTGGACACATACATCTTTGCATTGTATGATGAGGACTTGAAGCCTGGACCTACTTCTGAGAGAGCCTTTGGTCTTTTCAACCCCGATCAAACCATGATCTATGATGCTGGCCTCTCCAAGCAGCAGAGTAACACTTCCAGCCCTGTCGCAGCCCCGACTACCCCGGATATGTCAAAATCTCCAGTGACACCAAGGCCACCAACAGTGCCAACTCCAGCAACACAAAATAAATCAGCATCATGGTGTGTGCCAAAAGCAGGAGTAACAGCTGTGCAGCTGCAAGCAAACTTGGACTATGCTTGTGGGCAAGGGATTGATTGTAGCCCAATACAACAAGGTGGAGCCTGTTTTGAACCAAACACACTAGTAAACCATGCTGCTTTTGCCATGAATCTCCTTTATCAAACGGCTGGAAGGAATCCATTGACTTGTGATTTCTCACAGACAGCTATACTGTCAACGAATAATCCAAGTAAGTTCCTATACAATTTTTCCATAGTACGTTTCTTCCCATTAAAAAGGATTCGGAGTGGACAAAGACTTACTGGTTATCGTTTGTACTTGTAG 1503 0.4963 MAIWGSCSAKFLPLLALFLAFNPANCEPFIGVNYGQVADNLPPPSTTAKLLQSTSIGKVRLYGSDPAIIKALANTGIGIVIGAANGDIPSLASDPNFAKNWVSTNVIPYYPASNIILITVGNEVITSNDPNLMSQMLPAIQNVQNALDAASLGGKVKVSTVHSMAVLRDSEPPSAGRFHPEYDTVLQGLLSFNNGTGSPFAINPYPYFAYRDDPGRADNLAFCLFQPNAGRVDPNTNIKYMNMFDAQVDAVRSALDSMGFKNVEIVVAETGWPYKGDSNEVGPSLENAKAYNGNLIAHLRSMVGTPLMPGKSVDTYIFALYDEDLKPGPTSERAFGLFNPDQTMIYDAGLSKQQSNTSSPVAAPTTPDMSKSPVTPRPPTVPTPATQNKSASWCVPKAGVTAVQLQANLDYACGQGIDCSPIQQGGACFEPNTLVNHAAFAMNLLYQTAGRNPLTCDFSQTAILSTNNPSKFLYNFSIVRFFPLKRIRSGQRLTGYRLYL* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2172 500 Pfam Glycosyl hydrolases family 17 30 347 IPR000490 GO:0004553|GO:0005975
Dod08g2172 500 PANTHER GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 15 467 - -
Dod08g2172 500 Gene3D Glycosidases 29 358 - -
Dod08g2172 500 MobiDBLite consensus disorder prediction 351 388 - -
Dod08g2172 500 Gene3D - 386 477 - -
Dod08g2172 500 MobiDBLite consensus disorder prediction 351 370 - -
Dod08g2172 500 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 467 IPR044965 GO:0004553|GO:0005975
Dod08g2172 500 SMART X8_cls 392 472 IPR012946 -
Dod08g2172 500 Pfam X8 domain 393 462 IPR012946 -
Dod08g2172 500 SUPERFAMILY (Trans)glycosidases 30 348 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2172 Dod-Chr8 49458406 49463816 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2172 08 49458406 49463816 Dod08g2172 08 49458406 49463816 ECH