Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2170 ATGGCTCAACGCGCCACCTCCGATACTCGCCCTCGCCTCGCTCTTTCATCTCCATTGCAGATCTCCAAAGCTGATGTGCAAGGCTCTGACAACCCTATTCCACTTTCACCGCAATGGCTTCAGCCAAAGCCAGGGGAAAGTAAATCTGGAACAGGAACTGCGGAGAACCATGTGGTTTCAAGTCCACCATTAGGCCATCGCATGGAGAGCTTCAAGACATCTGGAAATGGAGAGGATGTGCGTGGTGCCCATAAGCGAAAGGATGTCTTTAGGCCATCCATGCTTGACTCGGAAAGTGGACGCCATGATCATTGGCATGATGAAGAGCGAGACACTAAGTCCTCCACACGTAAGGATCGTTGGAGGGATGGAGACAAGGACCTTGGTGATGCTCAGAAAGTGGATCGCTGGACAGAAAATTTGTCTGCTAGGAACTTTGGTGAAGGACGTCGTGGTGCGTCTGATAGATGGAATGATTCAGGAAACAGAGAAACTAATTTTGATCAGCGGCGTGAGAGCAAGTGGAATACACGCTGGGGTCCTGATAATAAGGAACCAGAAGGTCTTCGTGAAAAATGGAGCAACTCTGGAAAAGATGGTGATATACAACTAGACAAAGGTTTGTCTCATGTTTCCAATCATGGAAAGGATGAAAAGGAGGGAGATCATTATCGGCCATGGAGGCCGAACTTCTCACAAGGCCGTGGAAGGGTAGAGCCTCCTCATCCCCAAAATACAACCACGGGCAAGCACATTTCAACATTTTCCTATGGGCGTGCCCGTGGGGAGAATATGCCTCCACTCTCTACACTTGGACATGGCCGGGCTGGCTCTGGTGGTAGCTCTATGAATAGCATTTATCCTGGAACTATCTTGGATAAAGTTGAAAGTGGGCATGGACAACCCTCCCCGTATAAGTATAATAGGACAAAGCTGCTTGATGTGTACAGAGTGACCAATATGGATACAAATAGAAAACTAGTTGATGATTTTGTGCAGGTACCTAATCTTACACAGGATGAACCATTGGAGCCTCTTGCCCTTTCGGCACCAAATTCTGAAGAACTGTCTGTCTTAAAGGGTATTGACAAAGGGGACATTACTAGTAGTGGTGCACCTCAGGTGCCAAAAGATGGGAGGAACTCAGCAGATTTTACACATACAAGACGAATGAAGCCCGGAACTGCACCTCCCCAAGGATCTGAAGTTATCCTCAGACAGGATAAAATTATGAATTTTCGGTTGATGGAAAAAGATAGAGGTGAAGATGGAGATTCTTATAGAGTGTCTGATGAGATGCCCAGTAACAGAGACTCATCGTTTGAAGGAAATAGTTCTGTTCATTCTGGTGTAGCATGGCGAGCCATGCCAGTGGGTGAACATGGAACCACTCTCTTGCGTGATAGTAGAGTTGTGCCTAGTGATGTTAGATCAAGGAATTCGGATAATTTATCTGACTCCAAAGATGTAGGTAAGTGGAAATCTAGTGAAGACCCCATTGTTAAGAGGCAGCTATCTGGCTTTTTAGACAGTGAGCTCGAAACCAGGAGAGTAGCGCAGACTGCTCCAGAGGATTTATCCCTTTTCTATAAGGATCCTAAGGGTCTAATTCAGGGTCCCTTTAAAGGAATTGATATCATTGGATGGTTTGAGGCTGGATATTTTGGTATTGATTTACCTGTTCGTTTGGAGAACTCAGCAGCTGACTCACCGTGGTCGCCTCTTGGTGATGTCATGCCCCATTTACGAGCTAAAGCCCGACCACCACCAGGGTTTTCTGCTCCAAAACCGAATGACTTTACTGATATACCTGGCCAGCAGAATTCCAGTTCTTTTGGGAATACCCTTACTGGTATGGGTGAGCTTGAGATGTTGAGAAGGCAAAGTTCTGCTACTGAAGCTGAAAATAGATTTCTGGAGTCACTCATGTCTGGTAACAAGGGCAGTCCTCCACTTGAAAGTCTGCCGTTGTCAGAAGGGTTACAAGGGTTTAATGGAAATAATTCTGGTAATCTCGGTCCATCAGGAGTAGATAGTGGAAACAACCTTTACTTGCTGGCCAAGAAGTTGGCATTGGAACGTCAGAGGTCCTTGCCTAATCCTTACCCATATTGGCCGGGGCGAGATGCAGCTTCCCTTGCACCAAAGTCAGATATTCTCCTGGATGCATCATTGCATTCAAAACTTCTGTCATCAGTGAGTGACAATTCTCGTCAACCTCAATCCCAAAATCCCGAGTTGATGGCAATCATTCAGGGCTTATCCGACAGGACATCTGCAGGTTTTAATAATGGTGCAGCTGGATGGCCAAATTATCCCGTACAAGGTGGATTGGATTCTCTTCAGAACAAAATTGACTTACATCATGATCAGAATTTTCCGCAAGCTCCATTTGGAACTCAACAGCAAAGGCTGCAAGCACAAAACCAGTTATCATTAAGCAATTTACTTGCACAAGCTGCTGATGGCCCATCTAGTATTTTGACTGCAGAGAAGCTACTTTCTTCTGGTTTATCACAAGATCCCCAAGCATTGAATATTTTGCAACAGCAATACTTAATGCAGTTGCATTCTCAGGTTGCTGCTCCAGCACAGCAGATGCAATTGTTAGAAAAACTTCTGTTGCTGAAACAGCAACAGAAGCAGGAGGAGCAGCAGCAGTTATTGCGACAACAGCAGCAACTGCTATCCCAGGTGCTGCAGGACCAACAGTCTAGTCGGCGCTTTGGCGATTCATCTTATGGACATTTGCAGGGAGGTGCAATACCAATGGGTAATCTGCGCATGGATCCTTCTCAACTTCAACCACAAGAGATTTTTCCCATGGGCTCTCAGACACCAATTCCCAGTTTGCATGATGAAGTTAGTACTAATCCTTTGAATTTACCTGTGAAAGTTAGCCAAGACACTAGTTATAGTGTAAACAGTGAAGCATCTCCTATAAAGCTGCCGCACCAATTATTTGACAATACTAGTTCCCAGGAAAGCTGGGGCCCTATAGTTCCAGAACAAATTAATGAAAAGTATCAGAAGGAGATGTTCCCTACATTAACTCTTGTTGGAAGTTCTGCATTGCATGATCAGAACTGTTCCAGAGAGGAACCCCACATTGCACGTGAACCTCTTTATGCTTCAGACTTTACTGCTAAGTCTCTGGAGCAGGTTCTAGATGACACTTGTAGGACTGACGAAACCGTTTTGACTGCAACATCTAAGCCTGGTGAGAATTCTGGTCATGTGCCTGTTGTTCCTGTATCTTCAACTGGATCTCGTGGGATTGAACTGCCACCAGTGAGTTATCTTGGTATGGATGTGAAGGTCAAATCAGACATTGTGCATGAAGAGCAGCAGGCTGGAAGAGACGGCAACAATGTTGAGCCGTCTTTGGTAGATGTGCGAAATGTTGAAGCACCTGAGCCCAAGAAGGCTACTGAGAAGAAATCTAAGAAGCAAAAATCTTCAAAACCACACTCTTCTGATCAAGCAAAGGGATTGCTGAAAAATGTGACTTTGCAGCCATCAAAGCAATCAGAATCTGAAAAGCCAAATTCTAATGGTATAAAGTTAGGGCAAGATAACAAGGGTGAACCTATATATGAAACTTATCTGCAACAAACAATAGATGTGGGAAACCCAAGTGGTGGTTCTAACAAGGGTGAACCTGTATATGAAGAAGTTAATGGCATCCATGCTAGTGTTCCTGGGAGCATCACTGAAGCAGTTGTTGGGGGTGAGTCAAAGGTAGTTGGTTCTGTTTCCACACAGAATTCTGAAATACCTGCAGGACGAGCTTGGAAATCTGCTCCTGGTGTAAGACCAAAGTCTTTATTAGAAATTCAACAGGAAGAACAAAGAAGGGCAGAGGCAGAGGCAGAAATGCGTGTATCTGAGATTGCTACTTCTGTCAATTCGATGAGTCTGACAACTCCGTGGGTTGGGGCTGTGGCCAATCCAGACTCCATAAAGGTGTCTGGTGAAAGTCAACGAGGAGGAAATACTGTACATCTGGTTAAGCCTGAAACTTCTCAAAATCTTAAGATCAAGAAAAGTCCACTACATGACCTATTGGCTGAAGAAGTTTTAAAGAAATCTATCGAAAGAGATGCTGAAGTTCCTGATAGTACTCCATCTTCACAAAATATAGCTGTCCAGTCCGAATCATCAGAACCACTAGATGATTCAAAATTCATTGAGGCAAAAGATACCAAAAGAGGCCGAAAAAGATCCACAAAATCAAAGGGTTCAGGGGTTAAAGCCTCACTGCCCATTGCATCTGGGGAAGTCCCCATAGCTTCAAGCCCCATTGAAAAAGGCAAAAGCTCTCGCTCTTCCCAGCAGGAGAAAGATTTGTTGCCTGCCATCCCTGCCGGACCCTCTTTGGGAGATTTTGTTCCTTGGAAAGGGGAGAGAGAACCACCTAGCCCATCTCCTTCTCCAGCATGGTCTACTGATTCTGCTAGGGTTCCTAAACCAACATCATTAAGGGACATTCTAAAGGAGCAGGAGAAAAAGTCCTCTTCTGCAGTGTCTGCAAGCCCAATGCTTACCCCTCAGAAAGTACAGCCTGCCCAATCTACGTGGAATAATGGTTCTTCATGGTCAATCTCAGCTTCCTCTCCATCTAAAGCTGCATCTCCAATCCAGATAAACTCTCATGCTTCTCAGTCAAAATACAAAGTGGATGATGAGTTGTTCTGGGGTCCATTGGAGCAATCTGAGCATGAAACAAACAGGTCAGATTTCCCTCAACTTGCAAGCCAGGGGACCTGGGGGTCAAAGAATGTACCCATAAAAGGGAATTCACCTGGATTATTAACTCAACAAAAATCAGTGAGTGGCAAACAAGCTGAACAACGGTCTCTGTTATCATCATCACCTGCCTCATCTCAATCAATGCTGAAATTGAAAAAAGATGCCATAACTAAGCATTCAGAGGCCATGGGCTTCAGAGATTGGTGTGAGAATGAGTGTATTCGGCTTATTGGGACAAAAGATACTAGTTTCCTTGAGTTTTGCTTGAAGCAATCCAGATCCGAAGCTGAGATGCTTCTCATTGAAAACCTTGGATCATATGACCCTGACCATGAATTCATTGATAAATTCCTCGATTACAAGGAGTTATTACCATCAGATGTTTTGGAAATAGCCTTTCAAAGTAAGACTGATCAGAAAGTTACTAGAATTGGTGCTGGAGGCATTCCGTCTGCGAATGCAGATTTACAGGATGCAGACAACACCGAAGGATCTGCAAAAGGAGGAGGAAAGAAGAAGGGTAAGAAAGGGAAAAAGGTTAGCCCTGCAGTTTTGGGATTTAATGTCGTGAGTAACCGGATCATGATGGGTGAGATCCAGGCAGTAGAGGATTAA 5367 0.447 MAQRATSDTRPRLALSSPLQISKADVQGSDNPIPLSPQWLQPKPGESKSGTGTAENHVVSSPPLGHRMESFKTSGNGEDVRGAHKRKDVFRPSMLDSESGRHDHWHDEERDTKSSTRKDRWRDGDKDLGDAQKVDRWTENLSARNFGEGRRGASDRWNDSGNRETNFDQRRESKWNTRWGPDNKEPEGLREKWSNSGKDGDIQLDKGLSHVSNHGKDEKEGDHYRPWRPNFSQGRGRVEPPHPQNTTTGKHISTFSYGRARGENMPPLSTLGHGRAGSGGSSMNSIYPGTILDKVESGHGQPSPYKYNRTKLLDVYRVTNMDTNRKLVDDFVQVPNLTQDEPLEPLALSAPNSEELSVLKGIDKGDITSSGAPQVPKDGRNSADFTHTRRMKPGTAPPQGSEVILRQDKIMNFRLMEKDRGEDGDSYRVSDEMPSNRDSSFEGNSSVHSGVAWRAMPVGEHGTTLLRDSRVVPSDVRSRNSDNLSDSKDVGKWKSSEDPIVKRQLSGFLDSELETRRVAQTAPEDLSLFYKDPKGLIQGPFKGIDIIGWFEAGYFGIDLPVRLENSAADSPWSPLGDVMPHLRAKARPPPGFSAPKPNDFTDIPGQQNSSSFGNTLTGMGELEMLRRQSSATEAENRFLESLMSGNKGSPPLESLPLSEGLQGFNGNNSGNLGPSGVDSGNNLYLLAKKLALERQRSLPNPYPYWPGRDAASLAPKSDILLDASLHSKLLSSVSDNSRQPQSQNPELMAIIQGLSDRTSAGFNNGAAGWPNYPVQGGLDSLQNKIDLHHDQNFPQAPFGTQQQRLQAQNQLSLSNLLAQAADGPSSILTAEKLLSSGLSQDPQALNILQQQYLMQLHSQVAAPAQQMQLLEKLLLLKQQQKQEEQQQLLRQQQQLLSQVLQDQQSSRRFGDSSYGHLQGGAIPMGNLRMDPSQLQPQEIFPMGSQTPIPSLHDEVSTNPLNLPVKVSQDTSYSVNSEASPIKLPHQLFDNTSSQESWGPIVPEQINEKYQKEMFPTLTLVGSSALHDQNCSREEPHIAREPLYASDFTAKSLEQVLDDTCRTDETVLTATSKPGENSGHVPVVPVSSTGSRGIELPPVSYLGMDVKVKSDIVHEEQQAGRDGNNVEPSLVDVRNVEAPEPKKATEKKSKKQKSSKPHSSDQAKGLLKNVTLQPSKQSESEKPNSNGIKLGQDNKGEPIYETYLQQTIDVGNPSGGSNKGEPVYEEVNGIHASVPGSITEAVVGGESKVVGSVSTQNSEIPAGRAWKSAPGVRPKSLLEIQQEEQRRAEAEAEMRVSEIATSVNSMSLTTPWVGAVANPDSIKVSGESQRGGNTVHLVKPETSQNLKIKKSPLHDLLAEEVLKKSIERDAEVPDSTPSSQNIAVQSESSEPLDDSKFIEAKDTKRGRKRSTKSKGSGVKASLPIASGEVPIASSPIEKGKSSRSSQQEKDLLPAIPAGPSLGDFVPWKGEREPPSPSPSPAWSTDSARVPKPTSLRDILKEQEKKSSSAVSASPMLTPQKVQPAQSTWNNGSSWSISASSPSKAASPIQINSHASQSKYKVDDELFWGPLEQSEHETNRSDFPQLASQGTWGSKNVPIKGNSPGLLTQQKSVSGKQAEQRSLLSSSPASSQSMLKLKKDAITKHSEAMGFRDWCENECIRLIGTKDTSFLEFCLKQSRSEAEMLLIENLGSYDPDHEFIDKFLDYKELLPSDVLEIAFQSKTDQKVTRIGAGGIPSANADLQDADNTEGSAKGGGKKKGKKGKKVSPAVLGFNVVSNRIMMGEIQAVED* 1789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2170 1788 SUPERFAMILY GYF domain 519 582 IPR035445 -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 1114 1194 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 1736 1763 - -
Dod08g2170 1788 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1788 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 149 226 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 1367 1554 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 1391 1405 - -
Dod08g2170 1788 Gene3D - 513 592 IPR035445 -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 660 677 - -
Dod08g2170 1788 SMART gyf_5 526 581 IPR003169 GO:0005515
Dod08g2170 1788 MobiDBLite consensus disorder prediction 72 134 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 417 444 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 364 400 - -
Dod08g2170 1788 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1788 - -
Dod08g2170 1788 Coils Coil 1272 1299 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 1069 1092 - -
Dod08g2170 1788 Coils Coil 622 642 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 481 495 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 658 677 - -
Dod08g2170 1788 Pfam GYF domain 529 575 IPR003169 GO:0005515
Dod08g2170 1788 MobiDBLite consensus disorder prediction 1158 1190 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 1 58 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 1504 1554 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 1578 1629 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 1 251 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 417 432 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 1572 1629 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 470 495 - -
Dod08g2170 1788 CDD GYF 525 582 IPR003169 GO:0005515
Dod08g2170 1788 ProSiteProfiles GYF domain profile. 525 576 IPR003169 GO:0005515
Dod08g2170 1788 Coils Coil 867 898 - -
Dod08g2170 1788 MobiDBLite consensus disorder prediction 1371 1390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2170 Dod-Chr8 49439486 49448559 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2170 08 49439486 49448559 Dod08g2170 08 49439486 49448559 ECH