Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2149 ATGCCAGTGTTTGGCTTTCTTCACAGAAAAAAAAAGGGAAGAAAGAAAAGAAAAGGAAATGCATCTGAGCCATCGATTCGCGCTTGTTCCGTCTCGGATCGACGAATCTTCGGCGTTTTGAATGGAAACGGCGTCGTTTTCTTCGCTCGAGGTGGTGCTCGCTACTACTTCAACTGCTTCTACTTCTTCATGGAGGAGTTAAAGTTTCGGTGTAGCTCACGCGCTTTGTTCAGATTCCGCTTCAACCTTCGAAGATTCAACGTCGTCGTTTTCGAGATTGTATTGATATTGGCATGGTTGGAAGCTGGCAGTGGAAAGCCTCTAGAGCACGAACTTCAGTGGGGAGGATCGGAAGGGAGGGTTGAGAATGTTGCTTCGCATTCTTGCATCCATGACCAGATACTCGAACAGAGGAACCGGCCTGGTCGCAATGTGTATTCGGTCACCCCACAGGTTTACGAGCCTGGTCGTTCAAAACCCCTTCAGCACAGAGGTAGGGCATTGCTTGGAGTATCAACATCATCGGAGCCTCAAAAGGATGCGAAACAACCTATTAGGATTTATCTAAATTATGATGCTGTTGGCCACTCCTCTGACAGGGATTGTCGAAAAGTTCGTGATATTGTCAAACTTGGGGAGCCTCCAGTGACATCTCTGCCAGGTTTGCCTTTGTGCAATCCTCATGCTGATCCTCCAATCTTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATCTCAGGAGAGGACAAAAAGCATCGTCTTCGTAAAGCATTAGGTCAGACAGCTAACTGGTTTAGGAGAGCATTGGCTGTTGAGCCTGTCAAGGGAAATTTACGATTAAGTGGATATTCTGCATGTGGACAAGATGGAGGTGTGCAGCTCCCGCGTGAATATATTGAGGAGGGAGTCTCCAATGCAGACTTAGTTCTTTTCGTGACTACGAGACCTACAACTGGGAATACACTTGCTTGGGCAGTGGCATGTGAACGGGATCAATGGGGCCGTGCCATAGCTGGACATGTTAATGTTGCTCCTCGACATTTGACTGCTGAGGCAGAGACTTTGCTTTCTGCTACTCTGATACACGAGGTTATGCATGTTCTTGGTTTTGATCCACACGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGACGCCGTAATCAGGTTACTGAACAAGTTATGGATGAAAAGATTGGGCGGATAGTAACACGTGTGGTGCTTCCACGTGTTGTCATGCATGCACGATATCATTATGCGGCATTCTCTGGAAATTTTACTGGTTTAGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGGTCTCACTGGGAAAAAAGGCTACTAATGAATGAGATTATGACTGGTTCTGTGGATACAAGATCTGTAGTTTCTAAAATGACACTGGCTCTCTTGGAAGATAGTGGATGGTATAAAGCCAATTATAGCATGGCAGACCGGCTTGATTGGGGTCGCAACCAAGGTACTGAGTTTGTTACCTCCCCTTGCAATCTCTGGAAGGGGGCCTACCATTGCAACAAAACACAGTCTTCAGGTTGTACATATAACAGAGAGGCAGAGGGTTACTGCCCAATTCTAACCTATAGTGGAGATCTCCCTCAGTGGGCTCGATATTTTCCACAAGCTAATAAAGGTGGGCAATCCTCGTTGGCTGATTATTGCACTTATTTTGTTGCGTACTCTGATGGATCATGTACAGACATTAACAGTGCACGGGCACCTGATAGAATGCTAGGTGAAGTACGAGGAAGTAACTCTAGGTGTATGGCCTCATCATTAGTGCGCACAGGATTTGTACGGGGTTCTATGACTCAGGGAAATGGTTGTTATCAGCACAGATGTATTAACAATTCTTTAGAGGTTGCTGTTGATGGTATCTGGAAAGTGTGTCCTCAGGCTGGTGGACCCATTCAGTTCCCTGGATTTAATGGTGAATTAATCTGCCCTGCATATCATGAGCTCTGTAACACACAGCCAGTGGCTGTGTCTGGGCAATGTCCCAATGCATGTAATTTCAATGGAGATTGTATTGAAGGAAGCTGCCACTGCTTTCTTGGATTTCGTGGTCATGATTGCAGTAAACGTTCCTGCCCCAACAATTGCAATGGCAATGGCATGTGTGTCTCTGATGGAATTTGTGAATGTAAAGCTGGCTACACTGGCATTGATTGTTCCACTGCTGTTTGTGATGAGCAATGTAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGCGAATTCCGCTGTTCTGACTATGCGGGATACACTTGCCAGAACAGCTCCATGCTCCTCTCAAGTCTCTCAGTTTGCAAAGAAGTGCTGGGAAATGATGTTTCTGGACAGCATTGCGCACCCAGTGAACCTAGTATACTACAGCAGCTGGAAGAAGTGGTTGTCATGCCCAACTACCACCGATTATTCCCTGGTGGTGCGAGGAAATTATTTAATATATTTGGCAGCTCCTACTGTGATGAGGCAGCCAGACGACTTGCATGCTGGATTTCGATTCAGAAGTGTGACAACGATGGAGACAATAGGCTACGAGTATGTCATTCTGCTTGTCAGTCTTATAATCTTGCATGTGGAGCTTCACTGGACTGTGGTGACCAAACCCTTTTCAGTAGTGAAGGGGAGGGAGAGGGTCAGTGCACAGGCTCTGGTGAGATGAAATTGTCATGGTTTAATCGTCTAAGGACTAGTTTTTCTTTAAGAGATAGTTCCTTGAAAGGAATATCTGTAAGATATAGGCAGCTTCATTGA 2781 0.4581 MPVFGFLHRKKKGRKKRKGNASEPSIRACSVSDRRIFGVLNGNGVVFFARGGARYYFNCFYFFMEELKFRCSSRALFRFRFNLRRFNVVVFEIVLILAWLEAGSGKPLEHELQWGGSEGRVENVASHSCIHDQILEQRNRPGRNVYSVTPQVYEPGRSKPLQHRGRALLGVSTSSEPQKDAKQPIRIYLNYDAVGHSSDRDCRKVRDIVKLGEPPVTSLPGLPLCNPHADPPIFGDCWYNCTSEDISGEDKKHRLRKALGQTANWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPREYIEEGVSNADLVLFVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRNQVTEQVMDEKIGRIVTRVVLPRVVMHARYHYAAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFVTSPCNLWKGAYHCNKTQSSGCTYNREAEGYCPILTYSGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDINSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINNSLEVAVDGIWKVCPQAGGPIQFPGFNGELICPAYHELCNTQPVAVSGQCPNACNFNGDCIEGSCHCFLGFRGHDCSKRSCPNNCNGNGMCVSDGICECKAGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKEVLGNDVSGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDEAARRLACWISIQKCDNDGDNRLRVCHSACQSYNLACGASLDCGDQTLFSSEGEGEGQCTGSGEMKLSWFNRLRTSFSLRDSSLKGISVRYRQLH* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2149 926 Gene3D Leishmanolysin domain 3 507 565 - -
Dod08g2149 926 Gene3D Leishmanolysin domain 4 567 662 - -
Dod08g2149 926 Pfam Leishmanolysin 239 664 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Dod08g2149 926 ProSitePatterns EGF-like domain signature 2. 720 731 IPR000742 -
Dod08g2149 926 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 67 897 - -
Dod08g2149 926 Gene3D - 178 368 - -
Dod08g2149 926 Gene3D Leishmanolysin , domain 2 378 503 - -
Dod08g2149 926 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 182 668 - -
Dod08g2149 926 Gene3D Laminin 672 701 - -
Dod08g2149 926 Gene3D Laminin 703 734 - -
Dod08g2149 926 ProSiteProfiles EGF-like domain profile. 700 732 IPR000742 -
Dod08g2149 926 Pfam EGF-like domain 704 731 IPR013111 -
Dod08g2149 926 ProSitePatterns EGF-like domain signature 1. 720 731 IPR000742 -
Dod08g2149 926 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 67 897 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Dod08g2149 926 PRINTS Leishmanolysin (M8) metalloprotease family signature 313 342 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Dod08g2149 926 PRINTS Leishmanolysin (M8) metalloprotease family signature 466 495 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2149 Dod-Chr8 49189898 49199227 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2149 08 49189898 49199227 Dod08g2149 08 49189898 49199227 ECH