Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2142 ATGCGAAGAGAACAATCCCAGCCCCCTTGCCTCACAGATGTGGAGCCAGATAGAATCAGTTGCTTACCAGATCATGTTATAGACCAAATTCTCTCTCATTTGTCAATCAGGGAAGCAGTGAGGACAAGTGTTTTATCTAGCAAATGGAGGTACAAATGGGCCACGATACCAAATCTCGTGTTTGATAACCAATGTCTCTCTGTAGCTTCCCAAGATCATACAATTGCCAAGAGCAAGCTTTTGAGAATTATCGATCATGTACTTCTACTCCATTCCGGGGAGATCAACAAGTTCAAGCTCTCCCATCGTGATCTCATTGGTGTGACTGATATTGATCGTTGGACTCTTCATCTAACCCGAAGGTCTATCAAAGAGTTTGTGCTGGAAATATGGAAAGGGCCACGCTATAAGATACCCTCGTGCTTATTTGCTTGTCAAAGTTTAATTCATCTAGAATTATTTAATTGTTGGGTTAAACCTCCATCAACATTTCAAGGCTTCAGGAATTTGAAGAGTCTTGATCTGCAGCATGTCACCTTGGCGCAAGATGCGTTCGAAAACTTGATATCGAGCTGCCCTCTGCTTGAACGGTTGACATTGATGAACTTTGAAGGTTTCACTCATCTTAATATCGATGTGCCTGATCTTCAATTTTTTGACATTGGAGGTAAATTTGAAGATATTAGCTTTGAGAACACTTTCCAATTAGCTGTGGTATCCATTGGTTTGTCTTTGAACATTGAAACCAATCAAAGATTGCATGGAAGTTCGAGCAATTTGCTCAAATTTTTTGTCCATCTACCTCATGTACAAAGGCTGGAGGTTCAAAGCTATTTTTTAAAGTATTTGGCAGTAGGGATTGTGCCGCCTAAACTTCCTAGACCATGCATTGATCTGAATTATCTCTCCATACGCATGAACTTCAGTGATTCAAAGGAAATTTCAACTGCTCTATGCTTGTTAAGAAGCTCTCCTAATCTACAAGAACTAGAAGTATTGGCTCGCCCCGAGGAGCAGGCTGTTCTGTTAACACACCCCCATTGCGGGGAAGACGAATATTGTAGCTGTCCAGTCATGCAACTGAGATATGTGAGGATAGATGGCATCTCTGGTATCAAATCTGAATTGGATTTTATCAGTTTTCTGCTTCTATATTCTCCGGTTCTAGAAAGGATGACTGTGAAGTCTGTTCTAAACGGAGGGACAGAGTTGATGAAAGAGTTGTTGCGGTTCAGGAGAGCCTCAGGACGAGCTGAAATTATTTACCTGGAACCCTCTTAA 1281 0.4137 MRREQSQPPCLTDVEPDRISCLPDHVIDQILSHLSIREAVRTSVLSSKWRYKWATIPNLVFDNQCLSVASQDHTIAKSKLLRIIDHVLLLHSGEINKFKLSHRDLIGVTDIDRWTLHLTRRSIKEFVLEIWKGPRYKIPSCLFACQSLIHLELFNCWVKPPSTFQGFRNLKSLDLQHVTLAQDAFENLISSCPLLERLTLMNFEGFTHLNIDVPDLQFFDIGGKFEDISFENTFQLAVVSIGLSLNIETNQRLHGSSSNLLKFFVHLPHVQRLEVQSYFLKYLAVGIVPPKLPRPCIDLNYLSIRMNFSDSKEISTALCLLRSSPNLQELEVLARPEEQAVLLTHPHCGEDEYCSCPVMQLRYVRIDGISGIKSELDFISFLLLYSPVLERMTVKSVLNGGTELMKELLRFRRASGRAEIIYLEPS* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2142 426 ProSiteProfiles F-box domain profile. 16 50 IPR001810 GO:0005515
Dod08g2142 426 SUPERFAMILY F-box domain 16 78 IPR036047 GO:0005515
Dod08g2142 426 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 13 392 - -
Dod08g2142 426 PANTHER F-BOX PROTEIN-LIKE 13 392 - -
Dod08g2142 426 Gene3D Ribonuclease Inhibitor 114 380 IPR032675 -
Dod08g2142 426 SMART fbox_2 22 62 IPR001810 GO:0005515
Dod08g2142 426 Pfam Leucine Rich Repeat 169 193 IPR013101 -
Dod08g2142 426 SUPERFAMILY RNI-like 120 332 - -
Dod08g2142 426 Pfam F-box domain 19 52 IPR001810 GO:0005515
Dod08g2142 426 SMART 9598neu4hmm 355 423 IPR006566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2142 Dod-Chr8 49119174 49123170 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2142 08 49119174 49123170 Dod08g2142 08 49119174 49123170 ECH