Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2141 ATGCCTTTGGACACTCCATTACTTGATAACAGTGACAACAACCATGCTAATGCTGAGGATGAAAAGCCTCTTAACTTTATTCAGGGTTTTGGGTTTGAGTCCAAGAAGCTATGGAAACTAGCAGCTCCAGCGATCTTCACTCTCTTGTGTCAGTACTCCCTTGGTGCCCTCACTCTCACATTTACTGGTCTGGTTGATGAGCTTGACCTTGCAGCTGTTTCTGTTGAAAACTCTGTCATTGCTGGCCTCGCCTATGGTGTCATGTTGGGTATGGGGAGTGCATTGGAGACGCTATGCGGACAAGCATATGGTGCTGGTCAGATCAGGATGCTAGGGGTGTACATGCAAAGATCATGGGTCATCCTGTTGACTACTGCCCTTATTTTAGTACCTTTTTATATTTGGTCACCTCCCATCTTGAAGCTCGTTGGACAAACTACTGAGATCTCAGATGCTGCTGGAAAATTTGCTCTGTGGATGATACCCCAGCTGTTTGCCTACGCTTTGAACTTTCCAATCCAAAAGTTCTTACAGTCACAGAGGAAAGTTCTAGTGATGTTATGGATATCAGCATTCGTATTGGTGCTGCATGTAGTTTTCAGTTGGCTCATAATATTGAAGCTGGGATGGGGCTTAACAGGAGCAGCAATTACTCTTAACGCATCATGGTGGCTAGTTGTGATTTTGCAATTATTGTACATTTTCATCACCAAGTCTGATGGTGCTTGGGGTGGATTCTCATGGCTAGCATTTATTGACTTGTTTGGCTTTGTGAAGCTTTCTTTGGCCTCAGCTATTATGTTATGCTTGGAGTTCTGGTACTTGATGATACTGCTAGTGATAACAGGGCGTTTGAAAAACCCTCTAGTACCCGTTGATGCCATATCTATCTGTATGAACATACAAGGCTGGGATGCCATGATTGCTTTGGGATTCAATGCTGCAATAAGTGTGAGAGTATCAAATGAACTTGGGGCTGGTGATTATAAGGCTGCCAGATTTTCAGTGCTGGTGGTTTCCATCACCTCAGTATCCATAGGGGTTGTTGCCATGATCCTAGTACTCACAACAAGGCAATACTTTCCCTACTTGTTTACCACAAGTGTTGCAGTTGCCAAGGAAACGACTAAGCTTGCTGCATTGCTAGGTGTCACAGTACTTCTAAATAGCCTTCAACCTGTTTTATCCGGTGTTGCTGTTGGAGCTGGGTGGCAATCTCTTGTAGCATGCATCAACATTGGGTGCTACTATATTGTTGGATTGCCAGCAGGGATACTCTTGGGATTCACATTTAATTTTGGAGTTCAGGGTATTTGGGGAGGGATGATTGGAGGCATAACCTTGCAGACCATAATCCTTATAGTCGTCACTTCAATAACCAACTGGAGAAAAGAGGCTGAAGAAGCAGAGAGCCGGGTGAAGAAGTGGGGCGGATCAATTGCTTATGAACAATGA 1455 0.4426 MPLDTPLLDNSDNNHANAEDEKPLNFIQGFGFESKKLWKLAAPAIFTLLCQYSLGALTLTFTGLVDELDLAAVSVENSVIAGLAYGVMLGMGSALETLCGQAYGAGQIRMLGVYMQRSWVILLTTALILVPFYIWSPPILKLVGQTTEISDAAGKFALWMIPQLFAYALNFPIQKFLQSQRKVLVMLWISAFVLVLHVVFSWLIILKLGWGLTGAAITLNASWWLVVILQLLYIFITKSDGAWGGFSWLAFIDLFGFVKLSLASAIMLCLEFWYLMILLVITGRLKNPLVPVDAISICMNIQGWDAMIALGFNAAISVRVSNELGAGDYKAARFSVLVVSITSVSIGVVAMILVLTTRQYFPYLFTTSVAVAKETTKLAALLGVTVLLNSLQPVLSGVAVGAGWQSLVACINIGCYYIVGLPAGILLGFTFNFGVQGIWGGMIGGITLQTIILIVVTSITNWRKEAEEAESRVKKWGGSIAYEQ* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2141 484 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 470 - -
Dod08g2141 484 CDD MATE_eukaryotic 33 468 IPR045069 GO:0042910|GO:1990961
Dod08g2141 484 Pfam MatE 264 424 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod08g2141 484 Pfam MatE 43 203 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod08g2141 484 PANTHER PROTEIN DETOXIFICATION 33 19 470 - -
Dod08g2141 484 TIGRFAM matE: MATE efflux family protein 43 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2141 Dod-Chr8 49109995 49115112 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2141 08 49109995 49115112 Dod08g2141 08 49109995 49115112 ECH