Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2134 ATGGCGAAAGCGAGCGCCGGCGACGACGGTGAGCTCCGGCGAGCTTGCGCGGCGGCGATTGAGGACCAGAACCAGAAGATCGTGATGGCGATCCGAGTTGCCAAGTCCCATGGCATCTTGGGGAAATCCTCCAAGCTTGGTCGCCAGATGGCCAAGCCTAGGGTTCTCGCTCTCTCCACAGCAAAATCAAAAGGTCAGAGGACAACAGCTTTTCTTCGAGTTTTAAAGTATTCTACGGGAGGAGTTCTTGAGCCTGCAAAACTATACAAGCTGAAGCACCTCTCGAAAGTGGAAGTTGTAACAAATGATCCCAGTGGATGTACATTTACACTGGGATTTGATAACCTTCGAAGCCAGAGTGTGGCTCCTCCTCAGTGGACCATGCGCAATATTGATGACAGGAATCGCCTCCTTCTTTGTATCTTAAACATCTGCAAAGATGTTTTGGGTCGCCTCCCCAAGGTTGTTGGTATAGATGTTGTGGAAATGGCTCTTTGGGCAAAGGAGAATACACCATCACTTTCTACTCAGAGTAAAGAGCAGGATGGTGTCCCTATTGTATCTGCTGTGACCGAGACAGAATTGAAAGTCAATGTTGAGAAGGAACTTGTCTCCCAGGCGGAGGAAGAGGACATGGAGGCTCTTTTGGGAACTTATGTCATGGGTATTGGTGAGGCAGAGGCATTTTCTGAAAGGTTAAAGAGAGAGCTCCAGGCTCTGGAAGCAGCAAATGTGCATGCCATTTTAGAAAGTGAACCTTTGATGGACGAGGTGATGCAAGGGCTTGAAGCAGCAACAAATTGTGTGGAAGACATGGATGAATGGTTAAGTGTATTCAATCTGAAACTCCGGCACATGAGAGAGGACATTGAATCGATAGAAACCCGCAATAACAAATTGGTAATGCAATCAGTAAATAACAAATCTCTCATTGAGGAGCTTGATAAGCTGCTTGAACGATTGCGTGTCCCTTCTGAGTATGCAGCATCTTTGACAGGAGATTCATTTGATGAGGCTCGAATGCTTCAAAATGTAGAAGCATGTGAATGGTTGACTGGTGCCTTGCGTGGTCTAGAAGCGCCTAATCTTGACCCTGCATATGCAAACATGAGAGCTGTTAAAGAGAAGCATGTAGAACTTGAAAAATTAAAATCTACTTTTGTCAAGAAAGCTTCTGACTTTTTGAGAAGCTACTTTGCTAGTCTGGTGGACTTCATGATAACTGATAAAAGTTACTTTTCTCAGCGGGGACAGTTGAAGAGGCCTGATCATGCTGACCTTCGGTACAAATGCAGGACATATGCACGTCTTCTACAACACTTAAAGAGTCTTGACAAGAATTGCTTGGGTCCATTGAGGAAAGCTTATTGCAGTTCTCTAAACTTGCTTCTTCGCCGGGAGGCCCGTGAGTTTGCAAATGAACTTCGAGCTAGTACTAAAGCATCTAGAAATCCCACCGTTTGGCTTGAAGGTTCCACAGGTTCTGGTCAGAGTGTAAATGCTACTGACACTTCTACAGTCTCTGATGCTTATGCGAAGATGCTCACGATTTTCATCCCACTTCTGGTGGATGAGAGTTCGTTTTTTGCACACTTCATGTGCTTTGAAGTTCCTACCCTTGTTCCTCCAGGAGGTGTTGTTAATGGTAATAAAACTGGATATGATGATGATGATGCCAATGATGATGATTTGGGAATTATGGATATTGATGACAATGACAGTAAATCTGGTAAAAGTTCTGCAGAGCTTGCAGCTTTAAATGAATCACTTCAGGATTTGCTTGATGGAATTCAAGAAGACTTCTATGCTGTTGTGGATTGGGCATACAAGATTGATCCTTTGCGCTGCATATCAATGCATGGAATAACAGAACGCTATCTTTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGCCTTTTGCTTGGTGACCTGGAGGCTCGGATATCTATGCAGTTCAGCCGTTTTGTTGATGAAGCTTGTCATCAAATTGAAAGAAACGAACGCAATGTTCGCCAAATGGGTGTCCTATCCTACATTCCCAGATTTGCAACCCTTGCAACTCGGATGGAGCAGTACATCCAGGGACAGTCTAGGGATTTGGTTGACCAAGCATACACAAAATTTGTTAGCATAATGTTTGCAACACTGGAAAAAATTGCCCAAACAGATCCAAAGTATGCTGATATTTTTCTTTTAGAGAACTATGCTGCCTTTCAAAATAGTTTGTATGACCTTGCCAATATTGTGCCCACTTTGGCCAAGTTTTATCATCAGGCCAGTGAAGCCTATGAACAAGCTTGTACGCGCCATATTAGCATGATTATCTATTTTCAATTTGAGCGCCTTTTCCAATTTGCTCGAAGGATTGAGGATTTGATGTTCACTGTTGCACCTGAAGAGATTCCTTTCCAGCTTGGGCTGTCAAAAATGGATCTTCGGAAGATGTTAAAATCCAGCTTATCTGGGGTTGACAAGTCCATTGCTGCAATGTATAAGAAACTTCAGAAGAATTTGACTTCAGAAGAGCTATTGCCCTCCTTATGGGACAAATGCAAGAAAGAGTTTCTTGACAAGTATGAAAGTTTTGCCCAACTTGTGGCTAAGATTTACCCTAGTGAGACAATCCCGTCGGTAGCAGAGATGAGAGACCTTTTGGCCTCTATGTAA 2670 0.4375 MAKASAGDDGELRRACAAAIEDQNQKIVMAIRVAKSHGILGKSSKLGRQMAKPRVLALSTAKSKGQRTTAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVVTNDPSGCTFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENTPSLSTQSKEQDGVPIVSAVTETELKVNVEKELVSQAEEEDMEALLGTYVMGIGEAEAFSERLKRELQALEAANVHAILESEPLMDEVMQGLEAATNCVEDMDEWLSVFNLKLRHMREDIESIETRNNKLVMQSVNNKSLIEELDKLLERLRVPSEYAASLTGDSFDEARMLQNVEACEWLTGALRGLEAPNLDPAYANMRAVKEKHVELEKLKSTFVKKASDFLRSYFASLVDFMITDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSTGSGQSVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKTGYDDDDANDDDLGIMDIDDNDSKSGKSSAELAALNESLQDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGDLEARISMQFSRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFATLEKIAQTDPKYADIFLLENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYFQFERLFQFARRIEDLMFTVAPEEIPFQLGLSKMDLRKMLKSSLSGVDKSIAAMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVAKIYPSETIPSVAEMRDLLASM* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2134 889 PANTHER SEC3/SYNTAXIN-RELATED 1 889 - -
Dod08g2134 889 Coils Coil 190 210 - -
Dod08g2134 889 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 50 146 IPR028258 -
Dod08g2134 889 Coils Coil 223 250 - -
Dod08g2134 889 Coils Coil 283 303 - -
Dod08g2134 889 Pfam Exocyst complex component Sec3 226 486 IPR019160 GO:0000145|GO:0006887
Dod08g2134 889 Pfam Exocyst complex component Sec3 584 872 IPR019160 GO:0000145|GO:0006887
Dod08g2134 889 SMART Sec3_PIP2_bind_2 49 148 IPR028258 -
Dod08g2134 889 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2134 Dod-Chr8 49055264 49069641 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2134 08 49055264 49069641 Dod08g2134 08 49055264 49069641 ECH