Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2130 ATGTCGTTCACTCCTTCCGACTCCATCACGCTTCTTGCCGTTTATTCCGCAGAGAAAACCGGGAGAAGGTTCTGGAACTTTTCGAGGCTTGGGGGAGACTGTGCGAGCGGAAGGGCGGGGAAGTTGCCGGAGAGGATTTCCGATATATCTGAGTCCTGTGCTCAGATGGTGCTTCAGCTGCACAATCAAATTGAGGTTAGGGTGAAGATTAAGGTGGTCACGAGTACTCCAAGTGGTGCTGTGGCGGCTGAAGCGAGATGGAGTGGCTCCCATTGGGTTATACTGGACAAGAAGTTAAAGCAAGAGGTAAAGCATTGCATGGATGAACTCAATTGTAGTATTGTGGTGATGAATGGTTCAACCCCAAAAGTCCTCAGGCTTAACTTAGGATCCTCCGATGAACTCCAAACTCCATTTTTCTCTGCTACTTCTTCACCAGGCATAGATATTGGAAAGCTAAAAGGCTGCAAGTTGAAGCATTCCACCCCAGTGAGTAGCCCTGAAGAAGCAGGTTCTTCAGTCACAAGAACCATTGGAGTAAATTCAGAGTCAAGCTCTGATTCAATGGCTTCTTTTTTCCAAGTCTATGAACAAAATCCGCTGTTTGATGGTCAGGGACCACAGAAAAGATCAAACAAACCTATCAATGATTTGGAAAGGGATCGCCCTCCCTCTTTGGGAACACGCCCAAGCCCGGCATCATCTGTGGCAAGTAATAACAACACTGTATTTTGGATTCCTGAAAACCACATTGTGAATGAGAAGCTTCAGAGAGCTGAGAACAACAGATTCATCCAAAGAGCTAGGTCTCCGACTTCTAAAACTTTACTCGATAATTTCATACACTGTGATCAAGAGATGAGGACAAATGAACTTGGGTTTAACAAAGCTCAAAGCAGAAGTTATGCCTCCAACAAGGGCATCAGAGATAATAATGCCATTTCTATGGGAAGAACTTCATCTATACCGCCTCCTTTGTGCTCACATTGTCAGAATAAAGCACCTGTATTTGGAAAGCCTCCTAGGCAGTTTTCTTACAAGGAGCTAGAGGAAGCTACTGATATGTTCTCAGATGTGAATTTTTTGGCTGAAGGTGGATTTGGTGTGGTTCATAAGGGAATTCTCAGAGATGGCCAGGTTGTTGCAGTGAAACAGTTAAAGTTCAGGGGCTCTCAAGCTGATATTGATTTCTGCAGGGAAGTTCGGGTTCTGAGCTGTGCACAACACAGAAATGTTGTGTTGTTGATAGGATTTTGTGTAGAGGCCAATTTGAGGATATTACTCTATGAGTACATATGCAACGGATCCTTGGACCTTTACTTACATGGAGATGAGAGTATGGCTTTGGATTGGAACTCGCGGTTAAAGATAGCAATTGGAGCTGCACGAGGCCTACGCTACCTTCATGAAGATTGTAGAGTTGGTTGTGTAGTGCACAGAGACTTTCGTCCCAAAAATATTCTCTTAACCCATGACTTTGAACCTCTGGTGGCTGATTTTGGGCTTGCAAGATGGCATTCAGAATGGAATATAAATACTGAAGATCGAGTTGTAGGAACTTCAGGGTATCTTGCACCGGAGTATCTTGATGCTGGAAACTTTACATATAAAGTAGATGTGTATGCATTTGGAATCGTTTTGTTAGAGTTAATAACAGGTCGAAGAATCAGTGAGTTGGAACAGTTCAATGGGCACTCGTTTCTTTCTGATTGGTTTCACCCCATACGCATGTTAGAGCCTGATCATATCTTACAAAACGTTCGATCTCTCAACCCATGCTTTGGATCTGAGGCATCTATCGAATTTAACCTTCAATTGCAAGCCATGGCACGTGCTGCTTCATTGTGTCTACGTCTGGATCCTGATGCCAGACCTCCAATTTCCAAGATCCTGAGAGTACTGGAAGGTGGCGATCCAGTTCGTCCTATGGGTTTAGACTTCAATTCTGTTGGTAATAGTAGTGGCCATTTAACGGGTTTGACTTCGTACACTCCACCTAAAGGTACAATAAGTCATTCTCGTAGGCTATCACATTGA 2037 0.4394 MSFTPSDSITLLAVYSAEKTGRRFWNFSRLGGDCASGRAGKLPERISDISESCAQMVLQLHNQIEVRVKIKVVTSTPSGAVAAEARWSGSHWVILDKKLKQEVKHCMDELNCSIVVMNGSTPKVLRLNLGSSDELQTPFFSATSSPGIDIGKLKGCKLKHSTPVSSPEEAGSSVTRTIGVNSESSSDSMASFFQVYEQNPLFDGQGPQKRSNKPINDLERDRPPSLGTRPSPASSVASNNNTVFWIPENHIVNEKLQRAENNRFIQRARSPTSKTLLDNFIHCDQEMRTNELGFNKAQSRSYASNKGIRDNNAISMGRTSSIPPPLCSHCQNKAPVFGKPPRQFSYKELEEATDMFSDVNFLAEGGFGVVHKGILRDGQVVAVKQLKFRGSQADIDFCREVRVLSCAQHRNVVLLIGFCVEANLRILLYEYICNGSLDLYLHGDESMALDWNSRLKIAIGAARGLRYLHEDCRVGCVVHRDFRPKNILLTHDFEPLVADFGLARWHSEWNINTEDRVVGTSGYLAPEYLDAGNFTYKVDVYAFGIVLLELITGRRISELEQFNGHSFLSDWFHPIRMLEPDHILQNVRSLNPCFGSEASIEFNLQLQAMARAASLCLRLDPDARPPISKILRVLEGGDPVRPMGLDFNSVGNSSGHLTGLTSYTPPKGTISHSRRLSH* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2130 678 Pfam Protein tyrosine and serine/threonine kinase 362 589 IPR001245 GO:0004672|GO:0006468
Dod08g2130 678 ProSitePatterns Tyrosine protein kinases specific active-site signature. 477 489 IPR008266 GO:0004672|GO:0006468
Dod08g2130 678 MobiDBLite consensus disorder prediction 200 238 - -
Dod08g2130 678 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 5 667 - -
Dod08g2130 678 MobiDBLite consensus disorder prediction 159 182 - -
Dod08g2130 678 Gene3D Transferase(Phosphotransferase) domain 1 432 639 - -
Dod08g2130 678 SUPERFAMILY Protein kinase-like (PK-like) 336 634 IPR011009 -
Dod08g2130 678 PANTHER OS01G0253100 PROTEIN 5 667 IPR045271 GO:0004714|GO:0006468
Dod08g2130 678 MobiDBLite consensus disorder prediction 656 678 - -
Dod08g2130 678 ProSiteProfiles Protein kinase domain profile. 356 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g2130 678 Gene3D Phosphorylase Kinase; domain 1 323 431 - -
Dod08g2130 678 MobiDBLite consensus disorder prediction 165 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2130 Dod-Chr8 49005524 49014101 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Dod08g2130 PK_Tyr_Ser-Thr 1.1e-40 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2130 08 49005524 49014101 Dod08g2130 08 49005524 49014101 ECH