Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2117 ATGGCCGTGACGGACCTATTCGCCGGCGAGGTCGCGACGGAGCTCCTCCGCACCCTCATAGACATCTCACGCAAGTCCATACTGTGCAGAGGAAGCGCAGACCAGCTCATAACTTACATCACCGAACTCCTCCCAACCATTCAAGAGATCAAGTACTCCGGCGTCGAGCTTCCCCCTACACGTCAGTACCAGCTCGATCGCCTCTCGGAGATCCTCCACTCCGGCGTCGAGCTCTCGCACAAGGTTCTGAACTCGAGCCGTTGGAATGTGTACAAGAATCTGCAGCTAGCAAAGAAGATGGAGAAGCTTGAGAAGACCGTGTCACGGTTCATCCGAGGTCCTATGCAGGCTCACATACTTGCTGATGTGCACCACACTCGGTTCGAAATGGCTGAGAGGTTTGATCGGGTCGAGGCATCAAACCGGCGTTTGGAGAATTATTTTTGTTCCATGAAGATAGGGTTGGGAGGGGGAGGGTGGGTGGAGGCGGCTTTGAAGAGCATGGAGGTGGAGAAGAGTTGGGTTGAGGGCAATTTTGGAAATTTGGGTATGGCGTTGGAGGTTGGGAAGAAGAAGGTTAAGGAGATGGTTCTTGGGAAGAACGATGTTTGGGTTGTTGGGATTCATGGGATTGGTGGATCAGGAAAGACTACTCTTGCTAGAGAGGTTTGTGGAGATGAACAAGTTCGATTTTATTTCAAGGAGAGGATCTTGTTCCTGACTGTCTCACAATCCCCAAATGTGGAGCAGCTGAGAGCTAGGATCTGGGGTTTTATTATGGGCAACGATTGCTTGAATGTCGGTTATGCGGTTCCCCAATGGATGCCACAATTTGAGTGCAAAACCGAAGCTAGAAACCTTATTGTTTTGGATGATGTCTGGTCACTCACCGTGCTTGAACAACTTGTGTGTAGAATACCTGGCTGCAAATTTGTTGTGGTGTCCAGAGAAAAATTCCCAATTTGTACTGCCACTTATGAGGTGGAATTGCTGAGTAAAGAGGATGCACTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATACCTGTAACTACTAATGAGAATTTGGTCAAGCAGGTTGTGACTGAGTGTGGAAGGCTTCCACTGGCTCTTAAAGTGATAGGAGCTTCTTTGAGAGGTCAGACTGAGATGTATTGGGAAAGTGTTAAAGCCAGGTTGTCTCAAGGCCAAAGTATTGGGGAATCTTACCAAAACAATCTTATTGAGAGAATGGCAACCAGTGTCCATTACCTGCCAGCAAAGATCAAGGAATGCTTCTTGGACCTATCCCTCTGGACATTCTCATCAACATGTGGGTGGAAATCCATGATATCAGTGAAACCTGAAGCTTTCGCTATAGTGGTTGAGCTTTCAAACAAGAATCTCCTCACTTTGGTGAAAGAGGCACGTGCTGGAAGCATGTATAGCAGTTGCTTTGAGATATCTGTTACTCAACATGATATACTGAGAGACCTTGCTCTTAATTTGAGCAATCGTGGGAGCATATGCGAACGCCGACGATTAGTTATGCCAAAACGAGAAGAAAGTGGACTCCCTAAAGAGTGGTGGAGATACAAGGATCGCCCCTGTGAGGCTCAGATTGTTTCAATTCACACAGGTGAAATGAAAGAAGAGGACTGGTGCAACCTGGACTTTCCTAAGGCTGAAGTGCTGATTATTAATTTCACGTCCAGTGAATACTTCTTGCCTCCCTTCATTGAAAGAATGCCAAATTTGAGGGCATTAATTATTATAAACTACAGTGCTTCATATGCTTGCCTTCACAATATTTCAGTTTTTAAGAATTTGACTAACTTGAGGAGCCTATGGCTTGAAAAGGTGTCCACCCCACAATTGTCAGGCATTGTCTTGAAAAACTTAGGCAAATTATGTTTAGTCCTCTGCAAGGTAAATAACACTATGGAGGGGAAAGAAGCAGACCTGCCCCAAATCCTCCCCAACCTCAAAGAGCTCACTCTTGATCACTGTGATGATGTAACTGAGCTACCCTCAAGCATTGGTGGAATACATTCACTCAAAAATTTGAGTCTCACCAACTGCCACAATTTGACACAATTACCTGCTGAGTTGGGGCAACTAAGATCTCTAGAGATTCTCAGATTATATGCTTGTCCAGATTTGAAAGCACTTCCCCCTAGTATATGTGACATGATTAGGTTGAAGTATATCGACATTTCTCAATGTATTAACTTGTCAAGCTTCCCTAAAGAGATTGGTAAACTAGTAAACTTGGAGAAGATTGACATGAGGGAATGCTCCATGATTAGGAGCTTGCCAAAGTCTGCAGTGACATTGAAGTCTCTGAGGCTTGTAATTTGTGATGAGGAGGAATCAGGGATGTGGATAGATGTTGAGAAGGCCAAGCCAAATGTCCATATTCAGGTATCAGAGCAGCAATTTGATCTTGACTGGCTTAAAGAGTGA 2451 0.4517 MAVTDLFAGEVATELLRTLIDISRKSILCRGSADQLITYITELLPTIQEIKYSGVELPPTRQYQLDRLSEILHSGVELSHKVLNSSRWNVYKNLQLAKKMEKLEKTVSRFIRGPMQAHILADVHHTRFEMAERFDRVEASNRRLENYFCSMKIGLGGGGWVEAALKSMEVEKSWVEGNFGNLGMALEVGKKKVKEMVLGKNDVWVVGIHGIGGSGKTTLAREVCGDEQVRFYFKERILFLTVSQSPNVEQLRARIWGFIMGNDCLNVGYAVPQWMPQFECKTEARNLIVLDDVWSLTVLEQLVCRIPGCKFVVVSREKFPICTATYEVELLSKEDALSLFCHHAFGQKSIPVTTNENLVKQVVTECGRLPLALKVIGASLRGQTEMYWESVKARLSQGQSIGESYQNNLIERMATSVHYLPAKIKECFLDLSLWTFSSTCGWKSMISVKPEAFAIVVELSNKNLLTLVKEARAGSMYSSCFEISVTQHDILRDLALNLSNRGSICERRRLVMPKREESGLPKEWWRYKDRPCEAQIVSIHTGEMKEEDWCNLDFPKAEVLIINFTSSEYFLPPFIERMPNLRALIIINYSASYACLHNISVFKNLTNLRSLWLEKVSTPQLSGIVLKNLGKLCLVLCKVNNTMEGKEADLPQILPNLKELTLDHCDDVTELPSSIGGIHSLKNLSLTNCHNLTQLPAELGQLRSLEILRLYACPDLKALPPSICDMIRLKYIDISQCINLSSFPKEIGKLVNLEKIDMRECSMIRSLPKSAVTLKSLRLVICDEEESGMWIDVEKAKPNVHIQVSEQQFDLDWLKE* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2117 816 Pfam NB-ARC domain 191 416 IPR002182 GO:0043531
Dod08g2117 816 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Dod08g2117 816 Gene3D - 330 411 IPR042197 -
Dod08g2117 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 431 IPR027417 -
Dod08g2117 816 Gene3D Ribonuclease Inhibitor 546 790 IPR032675 -
Dod08g2117 816 Gene3D - 185 323 IPR027417 -
Dod08g2117 816 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 813 IPR044974 GO:0006952
Dod08g2117 816 PRINTS Disease resistance protein signature 366 380 - -
Dod08g2117 816 PRINTS Disease resistance protein signature 205 220 - -
Dod08g2117 816 PRINTS Disease resistance protein signature 676 692 - -
Dod08g2117 816 PRINTS Disease resistance protein signature 280 294 - -
Dod08g2117 816 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 7 813 - -
Dod08g2117 816 SUPERFAMILY L domain-like 559 779 - -
Dod08g2117 816 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2117 Dod-Chr8 48810047 48814081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2117 578 780 Receptor kinase-like Gene Family AT2G25790 27.941 2.68e-10 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2117 08 48810047 48814081 Dod08g2117 08 48810047 48814081 ECH