Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2116 ATGGCACTGAACGACTTCTTCGCCGGTGAGATAGCGACGGAGCTGCTGAAGATGCTGATAAGCATATCACGCAAGTCCTTACTATGCAGAGCTAGCGCAGACCATCTCATAACATACATAAGAGAACTCCTCCCCACCATCGAGGAGATCAAGTACTCCGGCGTCGAGCTCCCCGCCACGCGGCAGTCTCAGCTCGACCGCCTCTCTGAGATCCTCCGCTCCGGCGTCGAGCTCTCGCACAAGGTTCTCTCCTCAAGCCGTTGGAACGTGTACAAGAACTTGCAACTAGCAAAGAAGATGGAGAAACTTGAGAAGAACGTGTCACGGTTCGTGCAGGGTCCCATGCAGGCTCACATACTAGCTGACGTGCACCACACCCGGTTCGAGATGGCCGAACGGTTCGACCGGGTCGAGGCATCGAACCGGAAGCTGGAGCAGTACTTTGGTTCCATGAAGATAGGGGTGGGAGGCGGAGGGTGGGTGGAGGATGCTTTGAGGAGCATGGAGGTGGAAGATAATTGGGTCGAGGGTAGTTTGGGGAATTTGGGTGTGGGGTTGGAGCTTGGGAAGAAGAAGGTTGAGGAGATGGTTGTTGGGAGGAATGATCTTTTGGTTGTTGGGATTTGTGGGATTGGTGGATCAGGAAAGACAACTCTTGCTAGAGAGGTATGCAGAGATGAACAAGTTCGAAGTTATTTCAAGGAGAGAATCTTGTTTTTGACTGTCTCACAGTCTCCAAATGTGGAGCAGCTCAGAACGAAGATATGGGGGTTTATTATGGGAAATGAAAGCTTGAGTGCAAATTATGCAGTTCCACAATGGGTGCCACAACAATTTGAATGCAGAAGTGAGGCTAGGAAGAACTTGATTGTTCTGGATGATGTCTGGTCACTCTCAGTGTTAGAGCAGCTTGTGTGTAGAATACCTGGTTGCAAATTCATTGTGGGGTCTAGAGAAAAATTCCCAACAGTTTTTAATGCCACATATGAAGTGGAGTTGATGAGTGAAGAGGATGCCTTGTCTTTATTCTGTCACCATGCTTTTGGGCAGAAATCTATCCCTTCAGCTGTTAATGAGAATTTGGTCAAGCAGGTTGTGACTGAATGCGGAAGGCTTCCATTGGCTCTTAAAGTGATAGGTGCTTCTTTGAGAGATCAGACTGAAATGTTTTGGGCTTGTGTTAAAAATAGGCTTTCTCAAGGCCAAAGCATTGGGGAGTCCTATGAGATAAACTTGATTGATAGGATGGCAATTAGTACCAATAACCTACCAGAAATGATCAAGGAGTGCTTCTTGGATCTTTGTTCCTTCCCAGAGGATAAGAAGATTCCTCTAGATGTACTCATCAATATGTGGGTTGAAATCCATGACATTGATCAAACAGAAGCTTTTGCAATCGTGGTTGAGCTCTCAAACAAGAATCTCATCACCTTAGTGAAAGAAGCACGTGCTGGTAGCATGTATAGCAGTTGCTTTGAAATATCAGTTACTCAACATGATATATTGAGAGACCTTGCTCTCAATTTGAGTAACCGCAGCAGCATTAGTGAACGCCGGCGATTAGTTATGCCTAAGCGAGAAGAAGATGGAAGACTACCAAAACAGTGGTTGAGATACAAGGATAGACCATTTGAGGCCCAGATTGTTTCAATTCACACAGGCGAAATGAGAGAAGAGAACTGGTGTAAACTAGAGTTTCCTAAGGCTGAAGTGTTAATTATTAATTTCACATCCAGTGAATACTTCTTACCACCCTTTATTGATAAAATGCCAAATTTGAGGGCATTAATTATTATAAACTATAGTGCCTCATATGCTTGCCTTCACAATGTGTCAGTTTTAAAGAATTTGGCCAACTTGAGAAGCCTTTGGCTTGAAAAAGTTTCCACACCTCAGTTATCAGGCATTGCAATGAAAAACTTGGGGAAATTTTTTGTAGTCCTTTGCAAGATAAATAACAGTCTAGAAGGTAAAGATGCAGACCTAGCACAAATCTTCCCCAACCTCACTGAACTCACACTTGACCACTGTGATGATGTAACTGAGTTACCTTCAAGCATTTGTGGAATACATTCACTCCAAAATTTGAGCCTCACAAACTGCCACAATTTGACCAAATTGCCAGCTGAGTTAGGCAAACTAAGGTCTCTAGAGATTCTCAGATTATATGCTTGTCCAGATTTGAGAGCACTTCCCCCTAGCATATGTGACTTGATTAGGTTGAAGTATTTAGACATTTCTCAATGTATTAACTTGTCAAGCTTCCCTGAAGAGATTGGTAAACTAGTAAACTTGGAGAAGATTGACATGAGGGAATGCTCCATGATTAGGAGCTTGCCAAAGTCTGCAGTGACATTGAAGTCTCTGAGGCTTGTAATTTGTGATGAGGAGGTATCAGGGATGTGGATGGCTGTTGAGAAGGCCAAGCCAAATGTCCATATTCAGGTATCAGAGCAGCAATTTGATCTTGACTGGCTTAAAGAGTGA 2487 0.4407 MALNDFFAGEIATELLKMLISISRKSLLCRASADHLITYIRELLPTIEEIKYSGVELPATRQSQLDRLSEILRSGVELSHKVLSSSRWNVYKNLQLAKKMEKLEKNVSRFVQGPMQAHILADVHHTRFEMAERFDRVEASNRKLEQYFGSMKIGVGGGGWVEDALRSMEVEDNWVEGSLGNLGVGLELGKKKVEEMVVGRNDLLVVGICGIGGSGKTTLAREVCRDEQVRSYFKERILFLTVSQSPNVEQLRTKIWGFIMGNESLSANYAVPQWVPQQFECRSEARKNLIVLDDVWSLSVLEQLVCRIPGCKFIVGSREKFPTVFNATYEVELMSEEDALSLFCHHAFGQKSIPSAVNENLVKQVVTECGRLPLALKVIGASLRDQTEMFWACVKNRLSQGQSIGESYEINLIDRMAISTNNLPEMIKECFLDLCSFPEDKKIPLDVLINMWVEIHDIDQTEAFAIVVELSNKNLITLVKEARAGSMYSSCFEISVTQHDILRDLALNLSNRSSISERRRLVMPKREEDGRLPKQWLRYKDRPFEAQIVSIHTGEMREENWCKLEFPKAEVLIINFTSSEYFLPPFIDKMPNLRALIIINYSASYACLHNVSVLKNLANLRSLWLEKVSTPQLSGIAMKNLGKFFVVLCKINNSLEGKDADLAQIFPNLTELTLDHCDDVTELPSSICGIHSLQNLSLTNCHNLTKLPAELGKLRSLEILRLYACPDLRALPPSICDLIRLKYLDISQCINLSSFPEEIGKLVNLEKIDMRECSMIRSLPKSAVTLKSLRLVICDEEVSGMWMAVEKAKPNVHIQVSEQQFDLDWLKE* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2116 828 SUPERFAMILY L domain-like 571 792 - -
Dod08g2116 828 Gene3D - 414 505 IPR036388 -
Dod08g2116 828 Gene3D Ribonuclease Inhibitor 550 810 IPR032675 -
Dod08g2116 828 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 825 - -
Dod08g2116 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 434 IPR027417 -
Dod08g2116 828 Pfam NB-ARC domain 196 415 IPR002182 GO:0043531
Dod08g2116 828 PRINTS Disease resistance protein signature 282 296 - -
Dod08g2116 828 PRINTS Disease resistance protein signature 736 752 - -
Dod08g2116 828 PRINTS Disease resistance protein signature 369 383 - -
Dod08g2116 828 PRINTS Disease resistance protein signature 205 220 - -
Dod08g2116 828 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 825 IPR044974 GO:0006952
Dod08g2116 828 Gene3D - 181 325 IPR027417 -
Dod08g2116 828 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Dod08g2116 828 Gene3D - 333 412 IPR042197 -
Dod08g2116 828 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2116 Dod-Chr8 48800865 48807018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2116 202 791 WRKY Transcription Factor Family AT5G45050 23.895 4.72e-09 58.5