Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2113 ATGAAGGAGGTTGATCTGATTCCTGATGATCCTACATCAGCAGAGTGTATAAAGCAACTAGAGCAGGAAATCAAGATTCTCCGGAAACTACACCACCCCAATATTGTGCAGTATTATGGAAGTGAAATTGTTGGTGATCATTTGTACATATATATGGAGTATGTTCATCCTGGATCAGTTAATAAATTTATTAGGGAGCATTGCGGAGCTATGACAGAATCTGTGGTTCGCAATTTTACTAGGCATATCCTCTCTGGATTAGCCTACTTACATAGTACCAAGACTATCCACAGGGATATCAAAGGTGCAAACTTGCTGGTTAATGAATCAGGCATTGTCAAGCTTTCAGATTTTGGGATGGCAAAAATTCTGACAGGGAATTCATATGAACTTTCTTTGAAGGGTAGCCCCTATTGGATGGCTCCAGAGGTCATGAATGCTGCCACAAAGAATGAAACCAATCCTGACCTGGCCATGGCCATTGATATATGGAGCTTAGGGTGTACCATCATTGAAATGCTGACAGGAAAACCTCCTTGGAGTGAATTTGAAGGGCCTTCAGCAATGTTCAAGGTACTACAGCACAATACCCCACCTATGCCTGAAACTTTATCTTCAGTGGGAAAGGATTTCCTCCAGCAATGTTTCAGAAGGGACCCTGCAGACCGACCATCTGCAGCAATGCTTCTTAAGCATGCCTTTGTGCAGAATTTTCATGATCAAGATGTTCTAGTTCATCCACAGTTGTATCCTAGAGGAGGCCTGGGACAACGAGATAATTCACCTACTCCCGGAGAGACTACTAAAACTAGACATGATGTAATGGCAGCCTCCATGAGCACACGGATATTTAACAAAATTCAGAAATTAATTGGTGAATCTTCACAACATTACAATGTTGAGGAATCTAATCAGATTATACCTTCCCGTCACTCTCCTGTGCCAGAATTTCACAATCTTCAATCTTCCTTGAAAGCTGCTACCCTCAATTACTTCTATGTTGCAAACTCCAGCAACATACCCCTTACGCGCCAGAAGCATGTCATGAGCTAA 1053 0.4207 MKEVDLIPDDPTSAECIKQLEQEIKILRKLHHPNIVQYYGSEIVGDHLYIYMEYVHPGSVNKFIREHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVNESGIVKLSDFGMAKILTGNSYELSLKGSPYWMAPEVMNAATKNETNPDLAMAIDIWSLGCTIIEMLTGKPPWSEFEGPSAMFKVLQHNTPPMPETLSSVGKDFLQQCFRRDPADRPSAAMLLKHAFVQNFHDQDVLVHPQLYPRGGLGQRDNSPTPGETTKTRHDVMAASMSTRIFNKIQKLIGESSQHYNVEESNQIIPSRHSPVPEFHNLQSSLKAATLNYFYVANSSNIPLTRQKHVMS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2113 350 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g2113 350 Pfam Protein kinase domain 16 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g2113 350 SUPERFAMILY Protein kinase-like (PK-like) 13 315 IPR011009 -
Dod08g2113 350 PRINTS Tyrosine kinase catalytic domain signature 161 183 IPR001245 GO:0004672|GO:0006468
Dod08g2113 350 PRINTS Tyrosine kinase catalytic domain signature 52 65 IPR001245 GO:0004672|GO:0006468
Dod08g2113 350 PRINTS Tyrosine kinase catalytic domain signature 89 107 IPR001245 GO:0004672|GO:0006468
Dod08g2113 350 PRINTS Tyrosine kinase catalytic domain signature 204 226 IPR001245 GO:0004672|GO:0006468
Dod08g2113 350 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 342 - -
Dod08g2113 350 SMART serkin_6 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g2113 350 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 342 - -
Dod08g2113 350 Gene3D Transferase(Phosphotransferase) domain 1 1 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2113 Dod-Chr8 48780307 48786044 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod08g2113 Pkinase 5.2e-59 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2113 08 48780307 48786044 Dod08g2113 08 48780307 48786044 ECH
Dod08g2113 08 48780307 48786044 Dod09g2139 09 42833545 42838199 PCT