Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2107 ATGTGCCATTTGGCCACCACATACAAAGCCAATAACCAACAGGGAGAATACCTCTATAAGTTGATTCAATCAAAAAGATCTCAGAAGCCATCAAAATCACATGAAAAAGCTTATTATTCCACTGCTGAATTGGATGGTGTGGTGGATGATAGATTTTATTTTCCAAAGGTATGTGTTGATGAGCACCAATCTGGGCTGAAGGAAGCTGACAAAGTGAAGGCCTTGCCAGGACAACCTTATGGAATGGATTTTGATCAGTATGCTGGATATGTAACTGTGGATGCCAAAGCAGGGAGAGCACTCTTCTACTACTTTGTGGAGTCACCTCACAATTCTTCCACCAAACCTCTTGTTCTATGGCTAAATGGAGGGCCTGGATGCTCTTCACTGGGGTACGGAGCAATGCAAGAACTAGGACCTTTTAGAGTCAACAGTGATGGAAGAACACTTTACAGAAATGAGTATGCATGGAACAACGTGGCAAACGTTATATTCCTAGAGTCCCCAGCAGGAGTTGGCTTTTCATATTCAAGCACTTCCTCAGACAACCCTAGCATTGGTGACAAGAGCACTGCCTTGGACTCCTACACGTTTCTTGTAAACTGGCTTGAGAGGTTTCCTCAGTACAAAACTCGAGACTTGTTCATAACTGGAGAGAGCTATGCTGGCCATTACGTCCCTCAGCTAGCTGACACTATCCTCTCAAATAATAAGCAACTAACTAATCACAGAGTGATCAACCTGAAAGGGATAGCGGTTGGGAACGGATGGATAGATGATGGTCTGTGTACAAAGGGAATGTATGACTATTTCTGGACACATGGTCTGATCTCTGATGAAACCCATGCAACAATTGAAAGAAACTGTGACTTTGAGAGCGGTAACTTCTCTAGTGAATGCAACAATGCCACAAGTATAGCTGATGATGAGGTTGGGCATATTGACATATACAACATATATGCTCCACTTTGCGGTGATGATTCAGCTCCATCAAAAACTGGTGGCAACAATTTCGATCCTTGTTCTGACGATTATACCAGTTCCTACTTAAATCTCGCCGAAGTTCAAAAGGCTCTTCATGCTAAAGCCACAAAATGGTATGCTTGCAGCTGGCCAGGATGGACGGATAGTCCAGCCACTATTCTACCCACTATAAATCAGTTAATATCAAGTGGCATAAGCATCTGGATATATAGTGGGGACATAGATGGGCGTGCCCCAGTAACATCATCTAGGTACTCGATAAACGCCTTGAAACTTCAAGTGGAGACAGCATGGCGTCCATGGTACTTCGGCAAGGAGGTTGGAGGATACGTAGTAGGGTACAAAGGGCTCACACTCGTCACTGTAAGAGGAGCTGGGCACATGGTCCCAAGCTACCAACCACAGCGGGCATTAACAATGATCTCATCTTTCCTCCGTGGAGAACTTCCTCCCAAGAATTAG 1446 0.444 MCHLATTYKANNQQGEYLYKLIQSKRSQKPSKSHEKAYYSTAELDGVVDDRFYFPKVCVDEHQSGLKEADKVKALPGQPYGMDFDQYAGYVTVDAKAGRALFYYFVESPHNSSTKPLVLWLNGGPGCSSLGYGAMQELGPFRVNSDGRTLYRNEYAWNNVANVIFLESPAGVGFSYSSTSSDNPSIGDKSTALDSYTFLVNWLERFPQYKTRDLFITGESYAGHYVPQLADTILSNNKQLTNHRVINLKGIAVGNGWIDDGLCTKGMYDYFWTHGLISDETHATIERNCDFESGNFSSECNNATSIADDEVGHIDIYNIYAPLCGDDSAPSKTGGNNFDPCSDDYTSSYLNLAEVQKALHAKATKWYACSWPGWTDSPATILPTINQLISSGISIWIYSGDIDGRAPVTSSRYSINALKLQVETAWRPWYFGKEVGGYVVGYKGLTLVTVRGAGHMVPSYQPQRALTMISSFLRGELPPKN* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2107 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 15 477 IPR001563 GO:0004185|GO:0006508
Dod08g2107 481 PANTHER CARBOXYPEPTIDASE 15 477 - -
Dod08g2107 481 Gene3D - 381 475 - -
Dod08g2107 481 Gene3D alpha/beta hydrolase 66 326 IPR029058 -
Dod08g2107 481 Pfam Serine carboxypeptidase 76 475 IPR001563 GO:0004185|GO:0006508
Dod08g2107 481 ProSitePatterns Serine carboxypeptidases, serine active site. 216 223 IPR018202 GO:0004185
Dod08g2107 481 Gene3D - 341 371 - -
Dod08g2107 481 SUPERFAMILY alpha/beta-Hydrolases 72 476 IPR029058 -
Dod08g2107 481 ProSitePatterns Serine carboxypeptidases, histidine active site. 445 462 IPR033124 GO:0004185
Dod08g2107 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 176 IPR001563 GO:0004185|GO:0006508
Dod08g2107 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
Dod08g2107 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 202 227 IPR001563 GO:0004185|GO:0006508
Dod08g2107 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 165 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2107 Dod-Chr8 48719152 48729568 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2107 08 48719152 48729568 Dod08g2107 08 48719152 48729568 ECH