Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2098 ATGGAAGCAAAACCACTCAGGCCTGTAACTCCAAGTGATGATGATGGACACCTAGTTACCGTACTCAGCATTGATGGGGGCGGTATTAGGGGACTTATTCCAGCAGTCATACTTGGATTCCTGGAATCAGAGCTTCAGAAGCTGGATGGTGAACATGTAAGATTGGCAGATTACTTCGATGTGATTACGGGAACAAGTACTGGAGGATTGGTCACCACAATGCTTACTGCTCCAAATGATAAGAATCGACCCTTATATGCAGCCAAAGATATCAAGGACTTCTACCTTGAGCATAGCCCAAAAATCTTCCCGCAAAATACATGGAACAATTTCCTCTCATTGATTGTGAAGCCTATCAAATCTCTGATGGGACCCCAATATGATGGCAAGTATTTACATCGCCTTGTTAGGCAAAAACTAGGCGACAGAAAGTTGCACCAAACTCTGACCAATGTTGTCATCCCAGCCTTTGACATCAAGCGCCTTCAACCCTCCATCTTTTCCAGCTTCCAGCTGAAGAAGAGGCCATATTTGAATGGCTTGTTGTCGGATATATGCATTGCAACTTCGGCAGCTCCAACATATCTTCCAGCTCATTACTTCGAAACCAAAAATCATCACGGTGAAGTGATGAGCAAGTTCGACCTTATAGATGGTGGCGTCGCTGCAAATAATCCGGCATTGGTTGCTATAGCGGAAGTGTCAAACCAAATTAACCACCATGGACGAAGTGCAAACTTAAACATAGAACCGATGCAATACGAACGGTTCTTGGTGATATCTTTGGGAACAGGTTCACAGAAACAGGACATGAAATACACTGCCAATGAGGCAGCTAAATGGGGCATTTTGAGTTGGCTAACCACTGGTGGTAGCACCCCTTTAATTGATGCCTTTAATCAAGCTAGTTCTGATATGGTTGATTTTCACCTAGCTTCAGTTTTCTCTGCACTCAAATCTGACCATAACTACCTCCGAATCCAGGATGATACATTAACTGGGGACTTGTCTTCGGTTGATGTGGCCACCGAGAAAAATTTGAATGATCTCGTGAAAGTTGGGGAAGCATTGTTGAAGAAAGCAGTTTCTAAGGTTAACTTCATGACTGGCAAATACGAACCGGCTTTCCCTCATCAAACAAATGAGGAAGCCTTAAGGAGGTTTGCTTCACGACTATCCAAACAAAGGAGATTTCGTAAATCTGGAACGTCTATCAATGGGACTGCTTAA 1230 0.4358 MEAKPLRPVTPSDDDGHLVTVLSIDGGGIRGLIPAVILGFLESELQKLDGEHVRLADYFDVITGTSTGGLVTTMLTAPNDKNRPLYAAKDIKDFYLEHSPKIFPQNTWNNFLSLIVKPIKSLMGPQYDGKYLHRLVRQKLGDRKLHQTLTNVVIPAFDIKRLQPSIFSSFQLKKRPYLNGLLSDICIATSAAPTYLPAHYFETKNHHGEVMSKFDLIDGGVAANNPALVAIAEVSNQINHHGRSANLNIEPMQYERFLVISLGTGSQKQDMKYTANEAAKWGILSWLTTGGSTPLIDAFNQASSDMVDFHLASVFSALKSDHNYLRIQDDTLTGDLSSVDVATEKNLNDLVKVGEALLKKAVSKVNFMTGKYEPAFPHQTNEEALRRFASRLSKQRRFRKSGTSINGTA* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2098 409 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 22 231 IPR002641 GO:0006629
Dod08g2098 409 SUPERFAMILY FabD/lysophospholipase-like 19 369 IPR016035 -
Dod08g2098 409 PANTHER XYLOSE ISOMERASE 14 405 - -
Dod08g2098 409 Pfam Patatin-like phospholipase 22 231 IPR002641 GO:0006629
Dod08g2098 409 Gene3D Cytosolic phospholipase A2 catalytic domain 10 405 - -
Dod08g2098 409 CDD Pat17_isozyme_like 16 370 - -
Dod08g2098 409 PANTHER PATATIN 14 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2098 Dod-Chr8 48637100 48642108 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2098 5 399 Miscellaneous Gene Families AT2G26560 63.038 3.78e-172 485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2098 08 48637100 48642108 Dod08g2098 08 48637100 48642108 ECH