Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2089 ATGTCTGGTGCTACAAGGGGTGAACACCACCAAACGGTTCCCCTTGCGGTGCTGCTGAAGCGCGAATTGGCGAACGAGAAGGCTGAGAAGCCGGAGATTGTGTCAGGGCAAGCAGGGCAGAGCAAGAAAGGCGAGGATTTCACTCTGCTCAAAGCTGAGTGCCAGAGGGTGGCTGGAGATGGGGTTTCCACCTATTCTGTTTTTGGGCTATTTGATGGGCACAATGGAACTGCTGCTGCTATTTATGCTAAGGAGAATCTTCTAAATAATGTTTTAAGTGCGATTCCTCCTGATCTTAACAGAGATGAGTGGGTAGCAGCGTTGCCTAGGGCATTGGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAGCAGAAAGAAACTGATTGTCTTGAAAAATCTTGCCACAGGAGGTTGCGCATCACCTCTAGTGGGGGTGAAGTTGGTCGGCTAAATACAGGGGGAGGCACGGAGGTCGGACCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCGCGGTCTATTGGTGATATGGATATTGGTGAATTCATTGTCCCAGTACCCTATGTGAAGCAAGTGAAGCTGTCCACAGCCGGAGGCAGGCTAGTTATATGCAGTGACGGAGTTTGGGATGCTCTATCTGCAGAAGTTGTCCTTGATTGTTGTCGTGGCATGCCACCAGATTCTGCAGCATCACATATTGTTAAAATCCATTCATTTGTATATGGTTTCTTTGGAATCACTAAATAG 750 0.4773 MSGATRGEHHQTVPLAVLLKRELANEKAEKPEIVSGQAGQSKKGEDFTLLKAECQRVAGDGVSTYSVFGLFDGHNGTAAAIYAKENLLNNVLSAIPPDLNRDEWVAALPRALVAGFVKTDKDFQQKETDCLEKSCHRRLRITSSGGEVGRLNTGGGTEVGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSTAGGRLVICSDGVWDALSAEVVLDCCRGMPPDSAASHIVKIHSFVYGFFGITK* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2089 249 Gene3D - 19 136 IPR036457 -
Dod08g2089 249 PANTHER ALPHABET, ISOFORM E-RELATED 131 236 - -
Dod08g2089 249 Gene3D - 137 239 IPR036457 -
Dod08g2089 249 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 6 127 - -
Dod08g2089 249 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 131 236 - -
Dod08g2089 249 SUPERFAMILY PP2C-like 36 236 IPR036457 -
Dod08g2089 249 ProSiteProfiles PPM-type phosphatase domain profile. 46 249 IPR001932 -
Dod08g2089 249 CDD PP2Cc 34 236 IPR001932 -
Dod08g2089 249 Pfam Protein phosphatase 2C 140 223 IPR001932 -
Dod08g2089 249 PANTHER ALPHABET, ISOFORM E-RELATED 6 127 - -
Dod08g2089 249 SMART PP2C_4 24 243 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2089 Dod-Chr8 48441448 48452432 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2089 4 236 PP2C-type Phosphatase Gene Family AT1G47380 67.153 7.52e-129 369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2089 08 48441448 48452432 Dod08g2089 08 48441448 48452432 ECH