Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2083 ATGGAGGTTTCAAGCCTTCAAAAGATGTTGAAAACAGCACCATCTAAAGCGTTGGTTATCAGAATCAACTTGTTCTGTCTTGCCATCTTTCTGATTGTTTATGCTACCCTTCTCTTCCGTCCATCTTCTTCTGTCTATTTCGAGAATGCAGCCTCCCTTGTTAGATGCTCCTTGCGTGAATGCCATCACAAGACAGATAAAAGCATAAAAATGAAAGCAGTGTTGGAGGAGCCACAAGTGAAACCACAGATGAAAATGGTGAGGCCAAAGAAGAATGCAACCAAGGTAGATGTGCCTAGCTTCATTCATGAAACAATGAGGAAGGGAACGAAGATTGGAATGGTGAACTTTGATGAAGATGATGTTAGTGAATGGAGCATGCAAGGAGAAACCATCATACCTGTTCAATTTGAGAGGGTGTCAACCCTTTTTAATTGGACAGACTTGTTCCCTGAATGGATAGATGAAGAAGAAGAGAGTGATGTTCCATCATGCCCTGAGATACCTATGCCAGAGTTTGACAGATATGAAAACATGGACATGATTGTGGCAAAGTTACCATGCAATAAAAAGTACCCTCAAGAAGGGTGGGGGAGGGAAGTTTTCAGGTTACAAGTTCACCTCATTGTGGCAAACTTGGCTGTGAAGAAAGGCCAATGTTGGAGCTTCTTTAGATGCAATGACTTGGTGAAGCATGAAGGTGAGTGGTGGTATTATGAGCCAGAGGTGAAGAGGTTGGAGCAGAAGGTTTCATTGCCTGTTGGATCCTGCAAATTGGCTTTGCCTCTGTGGGAACAAGGGATTGACGAGGTGTACGACGTGTCCAAGATCGAAAAAACAGTGAGGAACAGCGCTCGATCAAAACGCGAGGCCTACGCAACAGTGCTCCACTCCTCCGTAGGCTACGTCTGCGGCGCCATAACGCTGGCACAGAGCCTCCTCCAAACGGGAACCAAACGCGACCTTATCCTCCTCCTCGACGAGTCCATCTCCGCCTCGAAGCGCAGCGTCCTCGCCAAAGCGGGTTGGAAGATCCGAATCATAACCCGGATCCGAAACCCGAAGGCCGAAAACGGCACTTACAACGAGTACAACTACAGCAAGTTTAGGCTGTGGCAGTTGACGGATTACGACAAGATGTCGGCTACGGGGAATGATCAGTCTATATTTAATTCGGGGATCATGGTTATTGAGCCTTCCAATTGCACGTTTCATGTGCTCATGGAGAGTAGGTACGACGTCGTTTCGTACAATGGTGGTGACCAGGGGTTCCTCAACGAGATCTTCGTGTGGTGGCACAGGTTACCTAGGAGGGTGAACTTCTTGAAGAACTTCTGGGCCAACACAACACTAGAAGCCAGTATGAAGAACCATCTATTTGGTGCAGACCCACCAAAATTATACGCAATTCACTACCTGGGTTTGAAGCCGTGGCATTGTTATAGGGACTACGATTGTAACTGGGACGTGCAGGATCAAAGGGTTTATGCAAGTGACGTGGCGCATCGAAGGTGGTGGAAGCTGCACGACAACATGGACAAGAGGCTTCAGAGTTTGTGTAGGCTCACGAAACGACGTCGTATGGAGTTGAACTGGGAGAGAAGGAAAGCTGGCAAGTTGGGTTTGCCTGATCAGCATTGGAAGATCAATATCACGGATCCTAGAAGATCTGGCTCACTTTTGATGAAGGAGTAA 1695 0.4714 MEVSSLQKMLKTAPSKALVIRINLFCLAIFLIVYATLLFRPSSSVYFENAASLVRCSLRECHHKTDKSIKMKAVLEEPQVKPQMKMVRPKKNATKVDVPSFIHETMRKGTKIGMVNFDEDDVSEWSMQGETIIPVQFERVSTLFNWTDLFPEWIDEEEESDVPSCPEIPMPEFDRYENMDMIVAKLPCNKKYPQEGWGREVFRLQVHLIVANLAVKKGQCWSFFRCNDLVKHEGEWWYYEPEVKRLEQKVSLPVGSCKLALPLWEQGIDEVYDVSKIEKTVRNSARSKREAYATVLHSSVGYVCGAITLAQSLLQTGTKRDLILLLDESISASKRSVLAKAGWKIRIITRIRNPKAENGTYNEYNYSKFRLWQLTDYDKMSATGNDQSIFNSGIMVIEPSNCTFHVLMESRYDVVSYNGGDQGFLNEIFVWWHRLPRRVNFLKNFWANTTLEASMKNHLFGADPPKLYAIHYLGLKPWHCYRDYDCNWDVQDQRVYASDVAHRRWWKLHDNMDKRLQSLCRLTKRRRMELNWERRKAGKLGLPDQHWKINITDPRRSGSLLMKE* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2083 564 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 288 381 IPR029044 -
Dod08g2083 564 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 382 516 IPR029044 -
Dod08g2083 564 PANTHER GLYCOGENIN SUBFAMILY MEMBER 7 379 - -
Dod08g2083 564 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 7 379 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Dod08g2083 564 PANTHER GLYCOGENIN SUBFAMILY MEMBER 379 557 - -
Dod08g2083 564 SUPERFAMILY Nucleotide-diphospho-sugar transferases 291 516 IPR029044 -
Dod08g2083 564 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 379 557 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2083 Dod-Chr8 48312460 48318589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2083 71 562 Glycosyltransferase AT4G33330 61.495 0.0 649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2083 08 48312460 48318589 Dod08g2083 08 48312460 48318589 ECH
Dod08g2083 08 48312460 48318589 Dod09g2116 09 42640632 42643855 PCT