Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2066 ATGGCTCTTCTCTTAGACAATTGTGAAGGCATTTTACTCTCTTTAGACACACACAAACCTGTTCCTGCACCTTTCCTCACAAAGACATACCAACTGGTAGATGATCCCGCCACCGATCACATAGTGTCTTGGGGCGAAGACGACACCACCTTTGTCGTTTGGAGACCCCCCGAGTTCGCTAGGGACCTTCTACCTAACTACTTCAAGCACAACAACTTCTCTAGCTTCGTTCGCCAGCTCAACACCTATGGTTTCAGAAAGATTGTGCCTGATAGATGGGAGTTTGCAAACGAGTTCTTTAAGAAAGGGGAGAAGCACTTACTATGTGAGATCCATAGAAGAAAGACATCACAACCTCAACAAGTACCCATGAACCATCAACATCATCACCCACATTCTCCAATGGGATTCAACAATAATATTCCCACCACTTTCTTTCCCTTCCAACAACACAACCGAGTCAGCATCTCTCCCCCTAACTCGGACGAGTTAGCATGGTGTGATGACTCGCCCCCAAGAAGCAACGGAACCAACTACAACTACAACAACAACAACACTTCGGTCACTGCACTCTCTGAGGACAATGAAAGACTTAGAAGAAGCAACAACATGCTCGTGTCCGAACTAGCACACATGAAGAAGCTCTACAATGACATAATCTACTTTGTCCAAAACCATGTTAAGCCTGTGTCACCAAGTAGCACTTACCCTTCTTTTCTACATTGCAACAACAACACACCACAACAACAACAACAAGCCTCAAATTGCAATAATAATGTTTCAATGGTTCATCAAAAGCCTATGAACCAGCTTTTGGGGTGTTATTCTTCTTCAAGTAACCACAACAATTATAAGCAACCACCCAATGATGTGAATTACTCTCCTACAAACACATCCAGGAGCACCATAACGATCGTTGAACAACCAAGTATGAGTAATAGTACTAATAATAGTTGCAAGACCAAGCTTTTTGGGGTGTCTCTTCAATCCAATAAGAAAAGGGTGCACCCTGATGAGTACAGATCTAACAATTTCGTGAAGAACTCGGAAACGAATTACAATAAGGCTCGTTTGGTGCTGGAAAATGATGATGATGATGACTTGGGATTGAATCTCATGCCTCCCTCCACTTGTTAG 1137 0.431 MALLLDNCEGILLSLDTHKPVPAPFLTKTYQLVDDPATDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTSQPQQVPMNHQHHHPHSPMGFNNNIPTTFFPFQQHNRVSISPPNSDELAWCDDSPPRSNGTNYNYNNNNTSVTALSEDNERLRRSNNMLVSELAHMKKLYNDIIYFVQNHVKPVSPSSTYPSFLHCNNNTPQQQQQASNCNNNVSMVHQKPMNQLLGCYSSSSNHNNYKQPPNDVNYSPTNTSRSTITIVEQPSMSNSTNNSCKTKLFGVSLQSNKKRVHPDEYRSNNFVKNSETNYNKARLVLENDDDDDLGLNLMPPSTC* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2066 378 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod08g2066 378 Gene3D - 17 116 IPR036388 -
Dod08g2066 378 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod08g2066 378 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod08g2066 378 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod08g2066 378 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod08g2066 378 PANTHER BNAC06G00310D PROTEIN 12 377 - -
Dod08g2066 378 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod08g2066 378 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Dod08g2066 378 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 377 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2066 Dod-Chr8 48117976 48120129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2066 1 377 HSF AT1G46264 53.435 1.60e-114 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod08g2066 HSF_DNA-bind 3e-32 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2066 08 48117976 48120129 Dod08g2066 08 48117976 48120129 ECH