Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2065 ATGGCTTTCCCTCAGCACCGCTTCCAACACCGCTACCAAACCCAACAACAACCACAAACGAAGTCTTTACGAAATATTGAAACAATGGAGGGTCAGATGCCACAACATGTGGCCTTTTACAACACCACTGATTTGCAAGATCATTCTCAACATCCACCCTACATTCCTCCATTTCATGTTGTTGGGTTTGCTCCGGGTCCAGTCCTTCCTGCTGATGGCAGTGATGGTGGTGGTGGTGTTGATTTACAATGTAATTATGGTTTGGAGCCTGAGAGGAAGAGACTAAAAGAACAGGATTTATTGGAGAACAATTCTCAGATATCTTCTGTAGATTTCCTGCAGCCACGATCGGTGTCCACTGGATTGGGCTTGTCGCTTGACAATACTCGCACATCTTCAACTGGAGACTCAGCTTTGTTGTCGCTCATTGGCGACAACATTGGTCGTGAGTTACAGCAGCAGGATGTAGAGATGGATAGATTTCTCAAATTGCAGGGTGAACGATTGAGGGAAACAATTTTAGAGAAGGTTCAGGCAACACAGCTTCAGAGTGTTTCGATCATTGAAGACAAAGTCCTTCAGAAACTTCGCGAGAAAGAAGCTCAGGTAGAAAGCATTAATAAGAGGAATATGGAACTTGAAGATCGAATGGAGCAATTGATTGTGGAAGCCGGCGCCTGGCAACAACGAGCGAGATACAATGAGAACATGATTGCTTCTCTCAAGTTTAATCTCCAGCAAGCATATGTCCAAAGCCGAGATAGCAAGGAAGGATGCGGCGACAGCGAGGTGGATGATACGGCTTCTTGCTGCAATGGCCGCTCCATTGATTTTCATCTGCTCTCAAAGGAGAACAATGATATGAAAGAGATGATGACATGTAAAGCTTGCAGAGTCAATGAAGTGACCATGCTTTTGTTACCTTGTAAGCACCTTTGCCTGTGTAAAGACTGTGAAAGTAAGCTTAGTTTCTGTCCTCTGTGTCAATCCTCTAAATTGATTGGCATGAAGGTATATATGTAA 1023 0.4418 MAFPQHRFQHRYQTQQQPQTKSLRNIETMEGQMPQHVAFYNTTDLQDHSQHPPYIPPFHVVGFAPGPVLPADGSDGGGGVDLQCNYGLEPERKRLKEQDLLENNSQISSVDFLQPRSVSTGLGLSLDNTRTSSTGDSALLSLIGDNIGRELQQQDVEMDRFLKLQGERLRETILEKVQATQLQSVSIIEDKVLQKLREKEAQVESINKRNMELEDRMEQLIVEAGAWQQRARYNENMIASLKFNLQQAYVQSRDSKEGCGDSEVDDTASCCNGRSIDFHLLSKENNDMKEMMTCKACRVNEVTMLLLPCKHLCLCKDCESKLSFCPLCQSSKLIGMKVYM* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2065 340 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 340 IPR017066 -
Dod08g2065 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 340 IPR013083 -
Dod08g2065 340 Coils Coil 189 230 - -
Dod08g2065 340 PANTHER F2G19.2 1 340 - -
Dod08g2065 340 Pfam Zinc finger, C3HC4 type (RING finger) 292 330 - -
Dod08g2065 340 PIRSF SBP1_RNase_bind 12 340 IPR017066 -
Dod08g2065 340 ProSiteProfiles Zinc finger RING-type profile. 294 329 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2065 Dod-Chr8 48090503 48093571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2065 282 330 Miscellaneous Gene Families AT4G39050 40.816 5.64e-07 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2065 08 48090503 48093571 Dod08g2065 08 48090503 48093571 ECH