Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2052 ATGGCTGAAGCTGTTATGAATTTCGTGAACACAACGTTGGATTGGGTGACTGGTGCTCTTGATGTGCCTTCAGCACGAGCTGTGGTTTTTGGATTCCAAATCGGTGGACATTTGTTTATCGAGGTTTTTCTCCTTGTGGTCATCCTTTTCTTGCTTTCCCAGAAAAGTTACAAGCCTCCTAAACGGCCCTTGACAAACAAGGAAATAGATGAGCTATGTGATGAATGGGTTCCTGAACCCCTTATTCCTTCTCTTAATGAAGAGATGCTGTATGAACCACCAGTGCTGGAGAGTGCTGCTGGGCCACATACCATAATTAATGGTAAGGAAGTTGTCAATTTTTCTTCAGCGAACTATCTTGGGTTGATAGGTCATCAAAAGTTACTTAAATCATGTTCTTCTGCTTTAGATAAATACGGGGTTGGTTCTTGCGGTCCTCGTGGGTTTTATGGAACAATTGATGTCCATCTTGACTGTGAAGCAAGAATAACAAAGTTTTTGGGAACACCTGATTCAATTCTCTACTCTTTTGGTCTTTCTACCATGTTCAGTGCTATTCCTGCTTTCTCGAAAAAAGGAGATATAATTGTAGCGGATGAGGGAGTTCACTGGGGAATACAGAATGGCCTTTATCTTTCTAGAAGCACGGTGGTGTATTTTAAGCATAATGACATCGAATCTTTAAGGCAAACTCTTGAGAACATTACTTCCAAAAATAAGCGGGCCAATAAATTGAGGCGTTATATTGTTGTTGAAGCTGTCTACCAGAATTCCGGTCAAATAGCACCCTTAGATGAGATCATTAAATTGAAAGAAAAATATAAGTTTCGAGTTTTGCTGGATGAGAGCAACTCATTTGGTGTGCTTGGAAAATCTGGAAGAGGTCTCACTGAACATTATGGAGTACCAATTGAGAAGCTAGATCTTATAACAGCTGCTATGGGACATGCATTGGCTACAGAAGGAGGATTCTGCACTGGAAGTTTAAGAGTTATAGATCACCAACGGCTGAGCAGTTCAGGCTACGTCTTCTCTGCTTCTTTGCCCCCATATCTTGCAGCTGCAGCAATTACAGCTATTGATATCCTGGAGGAAAATCCCAATCTGATAACAAAGCTGAGGAAAAACATTGTATTGTTATGGAAAGAATTGTCAGAAGTACCAGGTTTCAAAATCGCAAGTAATCCAGAGTCGCCAATTGTTTATTTGAGATTAGAGAAGTCAACAGGTTCCCCGAAAGATGACCTACATCTGCTGGAAAAGATTGCTGAGCTTGCCTTGAAAGAAGATTCTGTATTTGTGGTGGCTTCCCACAGATCAACATTGGACAAATGCCGTTTGCCTTTGGGAATCAGATTGTTTGTTTCTGCGGGGCATTCAGAGGCTGATCTTCGCAAGGCATCTGGATCACTGAAAAGGGTTGCAGCATTAGTCCTGGGTGGTCAATAA 1449 0.4155 MAEAVMNFVNTTLDWVTGALDVPSARAVVFGFQIGGHLFIEVFLLVVILFLLSQKSYKPPKRPLTNKEIDELCDEWVPEPLIPSLNEEMLYEPPVLESAAGPHTIINGKEVVNFSSANYLGLIGHQKLLKSCSSALDKYGVGSCGPRGFYGTIDVHLDCEARITKFLGTPDSILYSFGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDIESLRQTLENITSKNKRANKLRRYIVVEAVYQNSGQIAPLDEIIKLKEKYKFRVLLDESNSFGVLGKSGRGLTEHYGVPIEKLDLITAAMGHALATEGGFCTGSLRVIDHQRLSSSGYVFSASLPPYLAAAAITAIDILEENPNLITKLRKNIVLLWKELSEVPGFKIASNPESPIVYLRLEKSTGSPKDDLHLLEKIAELALKEDSVFVVASHRSTLDKCRLPLGIRLFVSAGHSEADLRKASGSLKRVAALVLGGQ* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2052 482 Pfam Aminotransferase class I and II 110 468 IPR004839 GO:0009058|GO:0030170
Dod08g2052 482 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 6 481 - -
Dod08g2052 482 Gene3D Aspartate Aminotransferase, domain 1 104 467 IPR015422 GO:0003824
Dod08g2052 482 Gene3D - 125 366 IPR015421 GO:0003824
Dod08g2052 482 Coils Coil 225 245 - -
Dod08g2052 482 SUPERFAMILY PLP-dependent transferases 84 474 IPR015424 -
Dod08g2052 482 PANTHER LONG CHAIN BASE BIOSYNTHESIS PROTEIN 1-LIKE 6 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2052 Dod-Chr8 47905319 47913261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2052 1 335 Acyl Lipid Metabolism Gene Families AT4G36480 77.015 0.0 558