Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2048 ATGAGTAGTAGCACCCCAACAAAATTCTTGGCCTCAATTTTGTACATGATGTTCTTGTTGTTGTCCCTTCTTATTGTCCACATGTCAGCACATGACATCAACAAATTAGGCACACTAAGTAGTTTCATGAGTAGTGGCCACAGGAACAACAGAAGTGGTGGACATGGTAGCAGCTCAAGCAACAACAAAAGCTGCAACAACAACAACAACAATAGCCAATTGGACACAACAGCAGCATGTCAAAAATCACTCACAATTGAAGCAGCATCTCCAATTTCGCCACTCAAAATAGATGGCCTAGTATTTGCAGACCAAAGGCTTGAAGTAGTGTATCCAGTGATCCAAAAATTCAAGTCCATAATAACCTCAGATCCCTTAGGAGTTACCAAAACTTGGGTAGGCTCAGATATATGTAGCTACAAAGGTTTCTTTTGTGACACCCCACCAGACAATAGTTCTGCCACTGCTTTAGCCTCAATTGACTTCAATGGTTTCCAACTTGTTGCTCCTACCCTTGATGGCTTTATTGATAAGCTACCTGATATTGCTCTATTCCATGTGAATTCCAACAGTTTTGGTGGCACAATCTCACCCCAAATTGCAAAACTCCCTTACCTTTATGAGCTTGATGTTAGCAACAACCAATTGGCTGGTCCATTCCCTATGGCTGTTCTAGGCATGAAAACCTTAACATTCTTGGACATAAGGTTCAATTCCTTCTCTGGGGCAGTGCCACCACAGATATTCAATCAAAATCTTGAAGTCCTTTTTATCAACAACAACATCTTCACTCAAGGGTTGCCTGATAATTTAGGCACCACTCATATTCTCTTGCTAACCTTAGCAAACAACAAGTTCATGGGACCAATACCAAGCAGCCTTCCAAAGGCTTTGTCCACTTTAACTGAGGTTTTGTTATTGAACAACCAATTAACAGGTTGCTTGCCTTATGAGATTGGTTATCTTGAAGAGGCAAAAGTGTTTGATGCTGGGAACAACCAATTGACGGGCCCTTTACCATTCTCCTTGAGTTGCCTTGGGAAGGTGGAGCTTCTCAATTTGGCTGGGAATTTGTTGTATGGCATGGTGCCAGAAGTGGTTTGTGCAAGTTTAAGCAACAATTTGGTCAATTTTTCCCTGGCTGATAACTATTTCACACTTGTGGGACCCTTTTGTAGGGTCTTAATTCAGAGGGGAATCCTTGATGTTAGTAACAATTGCATTCCTTATCTTCCATTCCAGAGATCAGTGGTTGAGTGTGCAGATTTCTTTGCACAACCAAGGATGTGTCCCTTCATGTGGTACCATAGTACTTTTATCCCTTGTAAGCTTCCTTTTCATAACACCCCGGTTTCTTCCATACCTTAG 1368 0.4167 MSSSTPTKFLASILYMMFLLLSLLIVHMSAHDINKLGTLSSFMSSGHRNNRSGGHGSSSSNNKSCNNNNNNSQLDTTAACQKSLTIEAASPISPLKIDGLVFADQRLEVVYPVIQKFKSIITSDPLGVTKTWVGSDICSYKGFFCDTPPDNSSATALASIDFNGFQLVAPTLDGFIDKLPDIALFHVNSNSFGGTISPQIAKLPYLYELDVSNNQLAGPFPMAVLGMKTLTFLDIRFNSFSGAVPPQIFNQNLEVLFINNNIFTQGLPDNLGTTHILLLTLANNKFMGPIPSSLPKALSTLTEVLLLNNQLTGCLPYEIGYLEEAKVFDAGNNQLTGPLPFSLSCLGKVELLNLAGNLLYGMVPEVVCASLSNNLVNFSLADNYFTLVGPFCRVLIQRGILDVSNNCIPYLPFQRSVVECADFFAQPRMCPFMWYHSTFIPCKLPFHNTPVSSIP* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2048 455 Gene3D Ribonuclease Inhibitor 276 417 IPR032675 -
Dod08g2048 455 MobiDBLite consensus disorder prediction 47 70 - -
Dod08g2048 455 PANTHER BNAA09G53810D PROTEIN 61 454 - -
Dod08g2048 455 SUPERFAMILY L domain-like 114 408 - -
Dod08g2048 455 Gene3D Ribonuclease Inhibitor 112 275 IPR032675 -
Dod08g2048 455 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 61 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2048 Dod-Chr8 47854534 47856236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2048 100 427 Leucine-rich Repeat extension Gene Families AT3G24480 42.683 1.20e-82 261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2048 08 47854534 47856236 Dod08g2048 08 47854534 47856236 ECH