Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2043 ATGGGCCACGCAGCTTCCACGGCCGCCGTCGGCAGCCGCCGAGACAGCGCTGCCGCCACCGCACAAGGCAACCGCTCCGGCAACTCGTCCAGGTCCAAATCCGCCTCCTCGATCTCTCCGATGCTCTCCTCCGCCGTCGCATCCGCCGAAGACGACGACTGGAACCGCCATGAGGCTGTCACGCCGGACTACATCTCCGATCTCCCCGACGAATGCTTAGCGACGGTGTTCCAGTCTCTGAGCTCTGCCGATCGGAACCGTTGCTCACTCGTGTGCCGGCGGTGGCTTCAGGTCGAAGGCCAGAGCCGCCACCGCCTCTCGCTGAACGCGCAATCGGAGCTTTTCCCGGCGATAGCGTCGCTGTTCTCGCGGTTCGATTCGGTTACGAAGCTCGCTCTGAAGTGCGATCGCAGATCCGTGAGCATCGGCGACGAGGCTCTCGTCCTCATCTCGCGGCGGTGCCCTAACCTCACGCGCCTCAAGCTCCGCGCGTGCCGCGAGCTCACCGACGCAGGAATGGAAGCGTTCGCGAAGAACTGCAAAGGATTGAAGAAGCTCTCGTGCGGATCCTGCACGTTCGGATCCAGAGCCATGAACGCGGTCCTCGAGAACTGCGCCTCGCTTGAGGAACTCTCTGTGAAACGCCTCCGCGGGTTAACCGACGCTGTGGCGGCGGATCCGATCGGTCCCGGCGCGGCGTCGTCGTCGCTCCGCACGATCTGCCTGAAGGAGCTCTACAATGGACAGTGCTTCGGCTCGCTGATTCTCGGCGCGAAGAATCTGCGAACCTTGAAGCTTTTCCGGTGCTCCGGCGACTGGGACAAGCTGTTCCAGCTCGTCGCCGAACGCGCCGCCGCAACGGCCGTCACCGCGGCGCCAAGCATCGTCGAGGTTCACCTCGAGAGGCTCCAAATTAGCGATAGTGGCTTGCAAGCCATCGCTAATTGTTCCAATTTGGAGATTTTGCATCTTGTTAAAACCCCTGAGTGCACTGATTTAGGTTTAATTGCGATTTCGGAGAGGTGCAAGCTTCTAAGGAAGCTTCACATAGATGGGTGGAAAGCTAATAGGATTGGGGATGAGGGTTTAATTGGTGTTGCTAAGGGTTGCCCTAATTTGCAGGAATTGGTGCTTATTGGTGTTAACCCTACGAAATTGAGTTTGGAGGTGTTGGCTTCGAATTGCTTGAATCTTGAAAGGTTGGCTTTGTGTGGTAGCGATACAGTTGGTGATCCTGAGATTTCTTGCATTGCTGCAAAGTGTGTGGCTTTGAAGAAGCTTTGCATAAAGGGTTGCCCTGTTTCGGATCATGGGATGGAGGCATTGGCTAGTGGGTGCCCTAATTTGGTGAAGGTGAAGGTGAAGAAGTGTAAGGGTGTGACATCTGAGGGTGGCGATTGGTTGAGGCAGATTAGAGTGTCACTTGCTGTGAATTTGGATACCGGCGAAGCGGATCATCAGGACGCAAGTGCCAGTGATGGGGGAGCGCAGGATAATGGGTTGGAATTTCCACCGATAACTAGCCAAGCTGCCGGAGGAGGAGGAGGAGCATTGGCCGGAGGTGGTGTTGCGTCGAGTAGCACCGGCCGGTCTACTTCGTTCAAGTCGAGATTAGGGCTTTTGTCTGGGAGGAATTTAGTGGCTTGCACTTTGAGAAGGTGGTCTGGTGGTAACTCTAATGCCCGCCATGGTTAG 1695 0.5681 MGHAASTAAVGSRRDSAAATAQGNRSGNSSRSKSASSISPMLSSAVASAEDDDWNRHEAVTPDYISDLPDECLATVFQSLSSADRNRCSLVCRRWLQVEGQSRHRLSLNAQSELFPAIASLFSRFDSVTKLALKCDRRSVSIGDEALVLISRRCPNLTRLKLRACRELTDAGMEAFAKNCKGLKKLSCGSCTFGSRAMNAVLENCASLEELSVKRLRGLTDAVAADPIGPGAASSSLRTICLKELYNGQCFGSLILGAKNLRTLKLFRCSGDWDKLFQLVAERAAATAVTAAPSIVEVHLERLQISDSGLQAIANCSNLEILHLVKTPECTDLGLIAISERCKLLRKLHIDGWKANRIGDEGLIGVAKGCPNLQELVLIGVNPTKLSLEVLASNCLNLERLALCGSDTVGDPEISCIAAKCVALKKLCIKGCPVSDHGMEALASGCPNLVKVKVKKCKGVTSEGGDWLRQIRVSLAVNLDTGEADHQDASASDGGAQDNGLEFPPITSQAAGGGGGALAGGGVASSSTGRSTSFKSRLGLLSGRNLVACTLRRWSGGNSNARHG* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2043 564 MobiDBLite consensus disorder prediction 484 506 - -
Dod08g2043 564 PANTHER F-BOX PROTEIN SKIP2 48 482 - -
Dod08g2043 564 PANTHER UNCHARACTERIZED 48 482 - -
Dod08g2043 564 Gene3D - 64 99 - -
Dod08g2043 564 MobiDBLite consensus disorder prediction 1 42 - -
Dod08g2043 564 Gene3D Ribonuclease Inhibitor 100 494 IPR032675 -
Dod08g2043 564 ProSiteProfiles F-box domain profile. 62 98 IPR001810 GO:0005515
Dod08g2043 564 Pfam Leucine Rich repeat 154 177 IPR001611 GO:0005515
Dod08g2043 564 SUPERFAMILY RNI-like 110 485 - -
Dod08g2043 564 SMART fbox_2 68 108 IPR001810 GO:0005515
Dod08g2043 564 MobiDBLite consensus disorder prediction 17 42 - -
Dod08g2043 564 SUPERFAMILY F-box domain 58 98 IPR036047 GO:0005515
Dod08g2043 564 Pfam F-box domain 65 97 IPR001810 GO:0005515
Dod08g2043 564 SMART LRR_CC_2 421 445 IPR006553 -
Dod08g2043 564 SMART LRR_CC_2 316 341 IPR006553 -
Dod08g2043 564 SMART LRR_CC_2 395 420 IPR006553 -
Dod08g2043 564 SMART LRR_CC_2 446 474 IPR006553 -
Dod08g2043 564 SMART LRR_CC_2 154 179 IPR006553 -
Dod08g2043 564 SMART LRR_CC_2 292 315 IPR006553 -
Dod08g2043 564 SMART LRR_CC_2 180 204 IPR006553 -
Dod08g2043 564 SMART LRR_CC_2 342 369 IPR006553 -
Dod08g2043 564 SMART LRR_CC_2 370 394 IPR006553 -
Dod08g2043 564 SMART LRR_CC_2 205 243 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2043 Dod-Chr8 47795412 47798183 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2043 08 47795412 47798183 Dod08g2043 08 47795412 47798183 ECH