Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2037 ATGGCACATCACCACCACCACCACCAACATCAAAATCAAAACCAGGACACCCCAAAACCCCTTGTTGATTCCTTGTACTGCTCAGAAGAACATTTGGAGGAACAAGTAGATTATGAGTACAACAGTAACTACTTAAGTTCCAAAACTACAACAAGAACAACAGTAACAAACACCCCTTTTGTTTTGTTGCTAGAACAAGACCTGTTCTGGGATGATGAGGAGCTAACAAATCTTTTGGCCAAAGAACAGCAAAACCAACTTTGCATTTGCCTTGAAAGCAACCGTGTTTTGGCCTTGGCTCGCAGAGAAGCTGTGGAGTGGATTATGGGAGTGAATGCACATTACTCTTTCTCTGCTCTCACAGCTGTTCTTGCTGTCAACTACCTTGATAGGTTCCTTTTCAGCTTCAGATTTCAGAATGAGAAGCTATGGCTCACACATCTAGCTGCTGTGGCATGCCTCTCCCTTGCTTGTAAGGTGGAGGAGACTCAAGTGCCACTTTCTGTAGACCTACAAGTGGAGGACAGTAAATATGTGTTTGAGGCAAGAACAATTAAGAGAATGGAGATTTTGGTCCTTTCCACACTTGGATGGAAAATGAATCCAGCAACACCTCTCTCATTCATTGATTACATCACAAGAAGACTTGGATTGAAGGGTTATCTCTGCTGTGAGTTCCTCAGGAGGTGTGAAGCTGTTCTTCTTTCTGTCTTTGCAGATTCTAGGTTTATGGGTTATCTTCCTTCTGTTTTGGCAAGTGCTACAATGATGCATGTGGTCAATAATGTGGAGCCTTGTCTAGGAGTTGAATACCAAAATCAGCTCTTGGGTATTCTTGGAATCAAAAAGGACAAGGTTGAAGAGTGCTATACTCTCATTTTGGAGCTTATGTCAAGGTGCAAACAATCCAATAACAAACGCAAAATTGGGTCCATTCCAGGTAGCCCGAATGGCGTAATGGATGTGTCATTTAGCTGCGATAGCTCCAATGACTCTTGGGAGGTAGCTGCTGCTTCTGTTTCATCTTCACCTGCAGACCCTTTGTCCAAGAAGGCTAGGACTCAAGATCATTCTTCTATTGAACCATCCAAAGAAAGATTTTCTCAGAATTCATCACTAGCTAGCTAG 1128 0.4282 MAHHHHHHQHQNQNQDTPKPLVDSLYCSEEHLEEQVDYEYNSNYLSSKTTTRTTVTNTPFVLLLEQDLFWDDEELTNLLAKEQQNQLCICLESNRVLALARREAVEWIMGVNAHYSFSALTAVLAVNYLDRFLFSFRFQNEKLWLTHLAAVACLSLACKVEETQVPLSVDLQVEDSKYVFEARTIKRMEILVLSTLGWKMNPATPLSFIDYITRRLGLKGYLCCEFLRRCEAVLLSVFADSRFMGYLPSVLASATMMHVVNNVEPCLGVEYQNQLLGILGIKKDKVEECYTLILELMSRCKQSNNKRKIGSIPGSPNGVMDVSFSCDSSNDSWEVAAASVSSSPADPLSKKARTQDHSSIEPSKERFSQNSSLAS* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2037 375 SMART Cyclin_C_2 203 328 IPR004367 -
Dod08g2037 375 MobiDBLite consensus disorder prediction 337 375 - -
Dod08g2037 375 MobiDBLite consensus disorder prediction 1 20 - -
Dod08g2037 375 Pfam Cyclin, C-terminal domain 204 327 IPR004367 -
Dod08g2037 375 PANTHER CYCLIN D3.1 PROTEIN 42 347 - -
Dod08g2037 375 SMART cyclin_7 106 194 IPR013763 -
Dod08g2037 375 Gene3D - 76 291 - -
Dod08g2037 375 PANTHER CYCLINS 42 347 IPR039361 -
Dod08g2037 375 CDD CYCLIN 101 193 IPR013763 -
Dod08g2037 375 Gene3D - 88 201 - -
Dod08g2037 375 SUPERFAMILY Cyclin-like 69 201 IPR036915 -
Dod08g2037 375 SUPERFAMILY Cyclin-like 204 303 IPR036915 -
Dod08g2037 375 Pfam Cyclin, N-terminal domain 88 201 IPR006671 -
Dod08g2037 375 ProSitePatterns Cyclins signature. 101 132 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2037 Dod-Chr8 47710840 47713134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2037 21 308 Core Cell Cycle Gene Families AT4G34160 51.361 1.11e-94 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2037 08 47710840 47713134 Dod02g0746 02 9690510 9692355 ECH
Dod08g2037 08 47710840 47713134 Dod05g1107 05 30891358 30893411 ECH
Dod08g2037 08 47710840 47713134 Dod06g0079 06 1055209 1057671 ECH
Dod08g2037 08 47710840 47713134 Dod08g2037 08 47710840 47713134 ECH
Dod08g2037 08 47710840 47713134 Dod09g2078 09 42320459 42322503 PCT