Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2025 ATGGCTTCGAGTTTTGACCGATGGGAAAAAGATCCTTTCTTTGACGCTGCTGAAGAAGTTCAGGAATCTGCAGACAGGATGGAATCTGCATATAGGACATGGGTTCATGCCATAAAAGACGCTTCCAGCATGTGGAACTCTGATGAGCTTAGCAGAGATCTAAATACTGCCCTTGGCACTGCTAAATGGCAGTTAGAGGAATTCGAACGGGCAGTCAGTTCAAGTTATAGCAGAAGCTCAAGTGAGTATACAAGAAATAGGCACCGAGATTTTATTGCTGCCATTGATGACCAGATCACGAAAGTTGAGCATTTGTTCAACGAATCAGTCCATTCGAGCGGCAAGGAGTCTCTGCCTTGGGTGCGTCTAGATGAAGGAGAACAACATGAACTTGCTTTGTTTCTTTCAGGAATCCCGGCAGCCAAAAGCAACAATCCCGCTGGCTGCAACAGCAGGGACTTTGAGAATGTACAATTAAATGATAGTGATTTAGTCAGTAATTGTTCAAAGAATTTACATGTTTCATCTGGGTGGGGTGAACCAAAGGAGGATATAACAAATGGGCATCGTAGGGCAGCTAGTGCTAGTGCTGATATTGGTTCTTGGAAAATTGCTGTTTCTGATGATCCACAGCAATGGAGTTCCTCCAGTGGTTCTTCCGGTCCTATGCACAAGGTAGCCAGTTTATCGGGATTTCTTAGTTCCATGGAAGCCGTATCTATATTGAAGTGGCCTAGGAACGGTTACAGAAAGCTGAATCATCATAAAGAAACTGATAATGCTCTACTTCCAACTACCGGAGTGGATAAGGGGACCAATGCATACGAAAGAAGTACGAGTTGTCTTGGTAGTTCTGATGAATGCTATGACAAGCAACTTTATGGATGGTATGGTGCTATTCAGAGACAGCTTCGGAGATCTCAATACCAAATGCAATACAGTCAGCCTGTTCGAATAACTGTTTCAATCATTGTTCTCCTTTGCTTGATTGGTAAGCTGTTTTACGCGGGTGTCATGTGTCTGTGTTTTTTTTATCTGCATTCCTACAAACACGAATGTACTTGCATACCCTGCAATTTCTAA 1083 0.4312 MASSFDRWEKDPFFDAAEEVQESADRMESAYRTWVHAIKDASSMWNSDELSRDLNTALGTAKWQLEEFERAVSSSYSRSSSEYTRNRHRDFIAAIDDQITKVEHLFNESVHSSGKESLPWVRLDEGEQHELALFLSGIPAAKSNNPAGCNSRDFENVQLNDSDLVSNCSKNLHVSSGWGEPKEDITNGHRRAASASADIGSWKIAVSDDPQQWSSSSGSSGPMHKVASLSGFLSSMEAVSILKWPRNGYRKLNHHKETDNALLPTTGVDKGTNAYERSTSCLGSSDECYDKQLYGWYGAIQRQLRRSQYQMQYSQPVRITVSIIVLLCLIGKLFYAGVMCLCFFYLHSYKHECTCIPCNF* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2025 360 PANTHER OS05G0443700 PROTEIN 1 333 - -
Dod08g2025 360 PANTHER EXPRESSED PROTEIN 1 333 - -
Dod08g2025 360 Pfam Syntaxin 6, N-terminal 11 102 IPR015260 GO:0016020|GO:0048193
Dod08g2025 360 SUPERFAMILY t-snare proteins 10 105 IPR010989 GO:0016020|GO:0016192
Dod08g2025 360 Gene3D - 9 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2025 Dod-Chr8 47484123 47486974 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2025 08 47484123 47486974 Dod08g2025 08 47484123 47486974 ECH
Dod08g2025 08 47484123 47486974 Dod09g2056 09 42071113 42074103 PCT