Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2011 ATGGCCTCAGCAGAGCAGCCTCCAAAGAAGCGAAAGCACTACGATACTCTCCCGGAATCACCGCCACCGCCACCACCTCCACCGCCGGAGACAGCTCCCGAAGCCATACCACCGCCGCCGCCGCTATCTCCGCAAACCCTACCTCACCCGTCGACTCCACCGCCGCCATCTCATGATGAGATTCTCGCGAAGCGGCGAAGCAAAGACGAGGTTCGAAGCGTGCTCGATTGCTTCAGGAGGATCAAGCTCTGCTTCTCGAAGAAGGATCCATTTATGCACGACCTTGAACAGAGCTACCTCGCTCTCATCACTGCTTCCAGAGGTTGTTTGAGTGCACAAAGAATTGTAGCAGATCTTATTCCTCGGTATGCATGTCACTGTCCAACAGCTTTGGAAGCTGCTGCTAAAGTGGTTATTGATATGCATAACTGGAGTTTGACACTAATCAGTAGAGGAGAGGATTCCGATGGTATTGCATTTGATACTGCTACAGCCTGTATTTTTGGCCTGGCTGATGTTTGCTGCACTGCTTCTTCGGTGGCACCGACCTCTGCTGTAGTTAGAGGAATTTGCTCTGCAGTTTTTCAGAATGTGCTATCCTTTTTTATATCCTCACTTGAGGGAAAGGATGTCTTACAGGTGGTTGGTAAGAGTTCCCTGAACATGCGGGATTCCCCTGAGGTATTTTCAGAGTTGAAGCAAAAGTTTTTAGATGAAGATGAATCCTCATTGACTAAACTGTCCAAGTCTCGCGCATTATGTCTGCTTTGGATATTCATCTCTTGTCCAAAGGACTTGATTGCAGCTTGTTTGGAGCTCTTAGGCTCTGCCACAGAAGAGGGAGCTTCCGAACGAGGACATCGTTTTCTGAGCCTGGTGACTAGCAGTGTTGATGATGGAGGAGCAGTTCACCCTTTGGATGCAAATGGTGGACCTAAATCAGGTTCAGGTTCAACTGGATCAGGCATCAGAGGAAATGAAGTTGATAAGGAAATAATGTCCGATGACAACCAAGTTTCTGATTGTGATTCATCTGTTCCAAGGAGCTGCTTGCTCATGATGGTTCTTGACAAGGACGCCTCACTGCGGAAGTGGATGTTGCATCGATGTAAGAAGTTATTAGACTTGCCTACTAATGCTTCACAGGAAATTGCAGCAGTACTGCAAGGAATTCTTGGGAGGTTTCCTCAACAAACCGATTTAGAAGACTGTCAAGTAGATAGTGATGAAGAGAAATCTGATTCTTCTATTTACATGAATAGGAACTATGCGGTTCCTAGGATTTCTAAGGAACATGAGAGCATTGGCAAATCATCCAGAAAAGTTTCTGTTGACACTGTTCCTGTATCAAAAGTGGGTTCTCATTTTGATAGTGGAGTCTCAAGGCCCGTGGGCATTGAGATGGGGGAGGAAGGGAGTATACCCCATGTTAGCTGTTCCACACCTAGGGACTCAGCAAACCATCAGATATTCTCATCTGCAACTAGGACACCTTTTGACTTTAGGAGTAACTCGTTTGAAGCTACTTCAACAGCAAGTCAAATTATCTGGTGCTTTGATGGGGATCCTGCGGCCATGGATATTGTCTCTGCTTCTACGAAGCTCTGGGTTGGTTATTTACCACCTGACATGCCTGAGAGCCATATTAGGTTTCAATTAGACAGATTTGGTCAAATTGAACTGTTCACTTTTTTCCCGGTGAAAGCATTTGCATTTGTTGAGTACAGAAGGATCATTGATGCGATTAAAGCTCGACACTATTTACCTGGAAGCTTCCCTTGCCGTGTAAAATTCATGGATGTAGGACTTGGAACTAGGGGTGCAATTAATGGTGTTGCAGTTGGCTCTAGTTCTCATATCTATGTTGGAAATATTTCTAGTCAATGGGCCAGGGATGAGATCCTACATGAATCAAGGAAAGTAATCCGTAAGGGCCCTCCCACAGTTATTGATCTCAGCTGTGAGTGTGCATTACTTATGGAATTTGAAACTCCTGAGGAAGCTACCTCTGTGATCTTGCACCTGAGACAGCTCCGAAAAGAAAGGAGTAACTACAACCCACATTTTGGACCAGGAACAGTTAATACTGGAATTGGTCATGCTTATATGGATGGGGGAAGACCCATGCCGGCCCCACCTCATCTTGACCTTAAAGTCAACATTCCAGCAAACTTGTCACATGGTATTGCTGGATCGCCTCATGCTCGAACTTTACCTGGGAGCCCTGCAGACAGCACTCGCACAAGGATATCTCACTTGTGTTCCTTACTCGCATCATTGCGTACAAAGTATAATATTAGTCAAAACATAGGTCTCCATGAGAACTATATGACCGGAACTGGAAATAGTTGTGCTTCCTCGATGCACGAGGAAGATACAGTACCATCCAGCAGTTTGTGGATAACTATTCCAAGGAGTAGCTCTCTGTTCCTCACGGATGATGAGCTAATGGCCATTTGCAACCTTGCTATTGGAAGCTCTGGCTCCATTGTGCGGTTGACACAAGCAAACATGCAGATGGGATGTGGTTGGTTTGTTGAATGCAGTAATATTGATGGTGCAGTTTCTGTTCTAAAGAATCTTCGTGGCTGTCCAGGGTTGTTCTTCCAGATAGAATTCAGCAAACCTGGAAATCAGACTGTTGTTCCATTTTCAAATAAACCAGAGAAGACTTCCATGGAGCTCGTATCCCCCAGAATAAATTCCCAGAATCACAGTGGTGGAGCACGTGAAGCACCTCTGTCGCAGTCGAACTGGCATTTTCCTGTTTCGGGGGATATTTCAGAAGTTGGAGCAAGGAAAACTGATGGTTATGATAATTTGTCGCTAGATACTCATCAAGGAGCTAACGTTCCACATATGCTCCCTGGAACACAAGGACTATCCATTCCACCACCGCAACAAATTCAGTCAGCTCCTTTTATTCGTCCTGTTTATGTGCCTCCAAATGGTCCATGGGATCCACGGGGAATAAATAATCATGTACCTGTCAACCAGTTTAAGCCTGGAGTAATGCCAAATAATCATTTACCTTTTATACCTGCTTCAGTTACTCCACTTGCTCAGATACAGGGAAATCCAATGCAGCCTTATGGCCAGATGATTCCTCCACCAGTTATGCCACCACCTTTGTCATCTTTGCCACCTCCTCAGCCTGAAATGCCACCTCCGCATCCGCCTTCTCCACCACCTTTACCCCAAACACAGCCCCCTATGGTTCCTCCGCCACCTGGTTCTCCTCCTCCACCTCCTCCTCCACCACTACCTGTCCAGGAACCAGTCGATATGGAATGTTCAGGGCAGTCTCTGCAGTACCAGTGGCAGGGAGCTCTCTGTAAAAGCGGGATCAACTACTGTACAGTTTATGCATGCAGAGCAGATTCAAATGTTTGCAGATATTCAAATGCCACATATGAGCCTGCTGAATGGCCCTCAAAATTAGACATGACTAAACGCACTGATTCCCGACATGTGAAATCAACATTTGCTGCTACTCCACCTAATAGAAGGGAAGTGTGCCGTTTGATCCCATCTTCCCCAAGTGACCTCAGAAGGTTTCAGGATTTTGTATTATACTTAAAGCAAAGGGACTGTGCTGGAGTCATTAAAATTCCAGCTGCTAAATCCATGTGGGCAAGGCTACTGTTCATACTCCCATACTCACCTGAAACATGCTCCATGCTTTCTATTGCACCAGATCCATCCGATTGCCTCATCGCTCTGGTTCTACCTAAAGATATGAACTATGAGTGGGCATGA 3759 0.4594 MASAEQPPKKRKHYDTLPESPPPPPPPPPETAPEAIPPPPPLSPQTLPHPSTPPPPSHDEILAKRRSKDEVRSVLDCFRRIKLCFSKKDPFMHDLEQSYLALITASRGCLSAQRIVADLIPRYACHCPTALEAAAKVVIDMHNWSLTLISRGEDSDGIAFDTATACIFGLADVCCTASSVAPTSAVVRGICSAVFQNVLSFFISSLEGKDVLQVVGKSSLNMRDSPEVFSELKQKFLDEDESSLTKLSKSRALCLLWIFISCPKDLIAACLELLGSATEEGASERGHRFLSLVTSSVDDGGAVHPLDANGGPKSGSGSTGSGIRGNEVDKEIMSDDNQVSDCDSSVPRSCLLMMVLDKDASLRKWMLHRCKKLLDLPTNASQEIAAVLQGILGRFPQQTDLEDCQVDSDEEKSDSSIYMNRNYAVPRISKEHESIGKSSRKVSVDTVPVSKVGSHFDSGVSRPVGIEMGEEGSIPHVSCSTPRDSANHQIFSSATRTPFDFRSNSFEATSTASQIIWCFDGDPAAMDIVSASTKLWVGYLPPDMPESHIRFQLDRFGQIELFTFFPVKAFAFVEYRRIIDAIKARHYLPGSFPCRVKFMDVGLGTRGAINGVAVGSSSHIYVGNISSQWARDEILHESRKVIRKGPPTVIDLSCECALLMEFETPEEATSVILHLRQLRKERSNYNPHFGPGTVNTGIGHAYMDGGRPMPAPPHLDLKVNIPANLSHGIAGSPHARTLPGSPADSTRTRISHLCSLLASLRTKYNISQNIGLHENYMTGTGNSCASSMHEEDTVPSSSLWITIPRSSSLFLTDDELMAICNLAIGSSGSIVRLTQANMQMGCGWFVECSNIDGAVSVLKNLRGCPGLFFQIEFSKPGNQTVVPFSNKPEKTSMELVSPRINSQNHSGGAREAPLSQSNWHFPVSGDISEVGARKTDGYDNLSLDTHQGANVPHMLPGTQGLSIPPPQQIQSAPFIRPVYVPPNGPWDPRGINNHVPVNQFKPGVMPNNHLPFIPASVTPLAQIQGNPMQPYGQMIPPPVMPPPLSSLPPPQPEMPPPHPPSPPPLPQTQPPMVPPPPGSPPPPPPPPLPVQEPVDMECSGQSLQYQWQGALCKSGINYCTVYACRADSNVCRYSNATYEPAEWPSKLDMTKRTDSRHVKSTFAATPPNRREVCRLIPSSPSDLRRFQDFVLYLKQRDCAGVIKIPAAKSMWARLLFILPYSPETCSMLSIAPDPSDCLIALVLPKDMNYEWA* 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2011 1252 MobiDBLite consensus disorder prediction 1 67 - -
Dod08g2011 1252 SUPERFAMILY RNA-binding domain, RBD 522 592 IPR035979 GO:0003676
Dod08g2011 1252 MobiDBLite consensus disorder prediction 304 326 - -
Dod08g2011 1252 Gene3D - 524 605 IPR012677 -
Dod08g2011 1252 PANTHER NUCLEIC ACID BINDING PROTEIN 1 1251 - -
Dod08g2011 1252 MobiDBLite consensus disorder prediction 1031 1092 - -
Dod08g2011 1252 CDD RRM3_Spen 535 602 - -
Dod08g2011 1252 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 533 627 IPR000504 GO:0003723
Dod08g2011 1252 SMART rrm1_1 534 597 IPR000504 GO:0003723
Dod08g2011 1252 Pfam SPOC domain 1101 1242 IPR012921 -
Dod08g2011 1252 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 1 1251 - -
Dod08g2011 1252 MobiDBLite consensus disorder prediction 18 57 - -
Dod08g2011 1252 MobiDBLite consensus disorder prediction 1024 1094 - -
Dod08g2011 1252 MobiDBLite consensus disorder prediction 1 17 - -