Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1996 ATGATGGCATTGGCACCCAAAGCCAATAGTGATGACCCAGAAGACCAAACTCTCATCATGCTAGAATCAGCATGTTCTGACTTGGAATCACTCCTTAAAACCTCAGACCAAATGGAAGAAAACCTTGGAACCATGGAGACAAGGTTCGATCTCCTACAAGGATCACTGTCCACATCATCAAGAAGGATCACACCTTTGCAATCCTTGGCCATGTCAAGGAAAGCCCTTGAGACCAGAATCAACAGAGCAATTTCCCCTGCTCTTCAACTACTTGACACTTTCAAGCTCACAGAGTCTCTTCAGCACACTCTCCTTGACCTCTCATCGAAGCTATCATCATCAGGGGAGAGGAGGACACAAAAGAGGGTCCAGAAGCTTCTAGAATACGTGGACTGTGTGGATCAGCTGAATGAGGCCATTAACTCCATATTGCAAGTAGGTGAGGCAGTGATTCAGAAGCTTCAAGAGGTTGTGGAGTTCATATGCAGAACAAAGGCTGCGGATCAATACAGGACACAGAGGTTGAGAGAGGCACTGGCTACTCTCAAGGCAATCTATGAAACCGAGGTGGATGAGATGAGGTTTGAGGGTTTGTTGGACCAGGCTTTGCTTCGTGTGCAGGATGAGTTTGAGGCCACATTATTGAACATGAAGCATGGAAACCTGGGAGATATGTCACTCCTGCAGCATGATGAAGGCCGTGATTCTCACGAACATGTTGGTTGTGAATTGGGGTCAGAGCTGGAAATTGAAGTCCTTACACGAATTGCAAACACTCTTGCTGCTAATGATTGCCTGGATATATGCATCGACATCTATGTCAAGGTGAGGTATAGAAGGGTTGCCAAAGCACTAATGAAGCTAAACCCTGATTACTTGAGAACATATACCCCAGAAGGAATAGATGAAATGGAGTGGGAAAGCTTGGAGGAAGCAATAACCCTTTGGATCCAACACCTCCAAGTTGCAGTGAAAAGGGTCCTCCTCTCAGAAAATACTCTCTGCCAAAGAGTCTTGGGCAGCATCATGGATGGACTAGTGTGGCCAGAATGCTTTGCCAAGATCTCAGACAAGATCATGGCTGTGTTCTTTAGGTTTGGAGAAGGTGTTGCAAGAAGCAGCAAAGAGCCCCAGAAGCTATTCAAGCTACTGGACATGTTTGAGTCATTACGGAGACTCAAACCACAAGTCCTTGAAACCTTTGAAGGTGAAGCTGGTGTGGATATTTGCACTAGGTTCAGAGAGCTTGAGAAGCTCATCATCGATGCCTCAAGCAAAGTATTTTGGGAATTTGGACTTCAAATTGAAGGCAATGCTGATGGCCATCCACCTCCACAAGATGGTTCTGTTCCAAAACTTGTTAGGTATGCCATTAACTACCTCAAGTACCTTGCCACAGAGAGCTACAGCACATCCATGGCTAAGGTTCTAAGAACAGAACAAATATGGAAAAATGGGAAATTGTCCAAACAAGAGACTGATGAGAGTTTACTTAGGAATGCAATTTCCAATGTCATGGAGGCACTTCAAAGAAACATTGAATCCAAACGCTCCCGTTGCAGGGACAAGATTTTGATCCACATATTCTTGATGAACACTTATTGGTACATTTACATGAGGACCAAGAACACTGAACTTGGTGAGCTATTGGGGGATCAATACATGAGGGCTGGTTACAAGGCAGTGGCTGAGGAATCAGCTTACATGTACCAAAAGCAAGCATGGGGTGTTTTGGTTGTGATTTTGGATGGTGAGGATGTGCAAGAGCATGGGAAAGACACTATAGGGAAATTGGTGACACAGAAAATTGAGAGTTTCTTCAAGTGTTTGGATGAGGTTTGTGAGAGGCATATAAGAGGGGGTTATAGCATACCAGATTTTGATTTGAGGGAACAAATGAGGGAAGCCACAATGAGGCTTGTGGTGCCTACTTATGCTGAGTTCTTGGAGTCTTACTCTGGATTCTTGCAGAGGAAAGTGTACCCTACTCCCGAAAGACTGCGAGCGAAGCTGGTGAAGGCTTTTGATAGTGGCAATGTGAAGGTCAGGCGGCGTGGTGGTTCTGCTATTAGTAACTCTGCGTCTATGGAGGGTGATGTAAAGGATTTCAGAAGGTCAAGATCAGACTCTAGAGATGTTTGA 2142 0.45 MMALAPKANSDDPEDQTLIMLESACSDLESLLKTSDQMEENLGTMETRFDLLQGSLSTSSRRITPLQSLAMSRKALETRINRAISPALQLLDTFKLTESLQHTLLDLSSKLSSSGERRTQKRVQKLLEYVDCVDQLNEAINSILQVGEAVIQKLQEVVEFICRTKAADQYRTQRLREALATLKAIYETEVDEMRFEGLLDQALLRVQDEFEATLLNMKHGNLGDMSLLQHDEGRDSHEHVGCELGSELEIEVLTRIANTLAANDCLDICIDIYVKVRYRRVAKALMKLNPDYLRTYTPEGIDEMEWESLEEAITLWIQHLQVAVKRVLLSENTLCQRVLGSIMDGLVWPECFAKISDKIMAVFFRFGEGVARSSKEPQKLFKLLDMFESLRRLKPQVLETFEGEAGVDICTRFRELEKLIIDASSKVFWEFGLQIEGNADGHPPPQDGSVPKLVRYAINYLKYLATESYSTSMAKVLRTEQIWKNGKLSKQETDESLLRNAISNVMEALQRNIESKRSRCRDKILIHIFLMNTYWYIYMRTKNTELGELLGDQYMRAGYKAVAEESAYMYQKQAWGVLVVILDGEDVQEHGKDTIGKLVTQKIESFFKCLDEVCERHIRGGYSIPDFDLREQMREATMRLVVPTYAEFLESYSGFLQRKVYPTPERLRAKLVKAFDSGNVKVRRRGGSAISNSASMEGDVKDFRRSRSDSRDV* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1996 713 PANTHER EXOCYST COMPLEX PROTEIN EXO70 15 676 IPR004140 GO:0000145|GO:0006887
Dod08g1996 713 Gene3D Exocyst complex component Exo70 165 685 - -
Dod08g1996 713 Pfam Exo70 exocyst complex subunit 316 671 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dod08g1996 713 SUPERFAMILY Cullin repeat-like 126 675 IPR016159 -
Dod08g1996 713 MobiDBLite consensus disorder prediction 686 713 - -
Dod08g1996 713 PANTHER OS08G0519900 PROTEIN 15 676 - -
Dod08g1996 713 MobiDBLite consensus disorder prediction 698 713 - -
Dod08g1996 713 Coils Coil 21 48 - -
Dod08g1996 713 Coils Coil 499 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1996 Dod-Chr8 47125528 47129857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1996 15 658 EXO70 exocyst subunit family AT4G31540 28.788 2.46e-76 257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1996 08 47125528 47129857 Dod08g1996 08 47125528 47129857 ECH