Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g2087 ATGGAGGGGATAGCTGAACCGAATTCATGCACAAGGCAAGTTTTGGAGAAGAAAGCAAGGCCACAAGAGCAATTGAATTGTCCAAGGTGCAATTCAACCAACACAAAGTTCTGTTACTACAACAACTACAGCCTCACACAACCAAGATACTTTTGCAAGACTTGTAGAAGGTACTGGACAGAAGGTGGTTCTCTTAGAAATGTCCCAGTTGGAGGTGGTTCCAGAAAGAACAAGAAGATCAACAACAACTCAGCATCATCACCATCATCAACATCATCAGCATCAGCATCATCACCAGCTTCATCATCTATATCAAAGGTTATTATTCCAGACCTAAACCCTAATAAAATAATGCAAGGAGGACAAGATCTTAACCTTGCTTTCTCTATGGACAAGTACCATCATCATGGCTTGTCACCTTATGTTGAGATGCCTAATATTAATGGTGATACCACTCATCACCAAAGCTGTAATTCTTCTTCTGCACCAAGTTCTCTTTCAGCTTTGGAGCTACTAAGGTCTAGCATGGCTTCTAGGGGTTTGAGTCCTTATGCTCCTAATAATCCCTTGATGCCAAACTCAGGTGCCCTTTACTCATCTGGGTTTCCCATGCAAGAAGTTGTTAAGCCAAATAATAACAACCTTGGATTTTCTATGGATGGGATGGGAAATAGGTCATATGATCATCATCAGGTCCAAGAGAATAACAATGGTGGGAGGGTTCTGTTCCCTTTTGGAGAAATCAAGCAGCAACAGCTCTCTTCATCAGCAGGTGCTGAAGTGGAAAACAATAATAAGGAACAAGGAAATTCAAGCACTGGATATTGGAATGGGATGATTGGTGAAGGGTCATGGTGA 858 0.4172 MEGIAEPNSCTRQVLEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKINNNSASSPSSTSSASASSPASSSISKVIIPDLNPNKIMQGGQDLNLAFSMDKYHHHGLSPYVEMPNINGDTTHHQSCNSSSAPSSLSALELLRSSMASRGLSPYAPNNPLMPNSGALYSSGFPMQEVVKPNNNNLGFSMDGMGNRSYDHHQVQENNNGGRVLFPFGEIKQQQLSSSAGAEVENNNKEQGNSSTGYWNGMIGEGSW* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g2087 285 MobiDBLite consensus disorder prediction 253 285 - -
Dod07g2087 285 MobiDBLite consensus disorder prediction 253 279 - -
Dod07g2087 285 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
Dod07g2087 285 MobiDBLite consensus disorder prediction 76 100 - -
Dod07g2087 285 PANTHER DOF ZINC FINGER PROTEIN DOF3.7 8 280 - -
Dod07g2087 285 MobiDBLite consensus disorder prediction 66 100 - -
Dod07g2087 285 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 280 IPR045174 GO:0003700|GO:0006355
Dod07g2087 285 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Dod07g2087 285 Pfam Dof domain, zinc finger 23 79 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g2087 Dod-Chr7 52020802 52022052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g2087 17 285 C2C2-Dof Transcription Factor Family AT3G61850 47.241 1.05e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod07g2087 zf-Dof 2.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g2087 - - gmx:778110 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g2087 07 52020802 52022052 Dod07g2087 07 52020802 52022052 ECH
Dod01g3649 01 77895450 77897445 Dod07g2087 07 52020802 52022052 PCT