Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1344 ATGGTTTTTACTTCCATACCAGCAGCTTATCTTGATGCAGCCAACTGGCAGCAACAGCAACAACCAAATCACCAACCTGGCAACAATAATTCCGCCTCTCAGCAGCTTCTTCCACCACCACCGCCGCCACCGCCTCCAGCACAGCCTCATGGAGCCGGTGGTGCCGGCTCCATCAGACCTGGCTCGATGGCGGATAAGGCAAGGATGGCCAACCTACCTATGCCTGAGACTGCACTCAAGTGTCCAAGATGTGAATCTATCAACACCAAGTTTTGCTATTTCAACAACTACAGCCTCTCTCAGCCCCGCCATTTCTGCAAGACCTGCAGGAGGTACTGGACAAGGGGCGGCGCCCTCAGGAATGTGCCTGTCGGCGGAGGCTGCCGGAGGAACAAGCGGAGCAAAGGAAGTGGCAGCTCCAATTCCCCGGTGAGCTCCGACCGCCAAACGGGGAGCGCTAGTTCCACCAACTCAGCCTCTTCCAACAGTGGCTCAGCTGCTGACATAGTAGGCCTTGCCCCCCAGATGCCACCACTGAGGTTCATGTCTCCATTGCATCACCAGCTCACAGATTTTGCTGCTGGAGACATGGCCTTAAACTATGGCCTCAACTATGGCACAATTTCTGGCCCAGTGGGGGGTGTAGGAGACTTGAGTTTCCAAATGGGGAACTCTTTAGGTGCAGCAAGTGGTGCTGGTTGTGGCTCTTCCATCCTATCTGGTGCTGGTTTGGAGCAATGGAGGGTGCCACAAACACAGCAGTTTCCCTTCTTGGCTGGTCTGGAAGGTTCACAAGCTGGTGGATTGTACCCTTTTGAAGGTAGTGCTGAGGTGACTGGGTATGGTGCTAGTGGTGTTAGTGTTAGTCATCATCATGTGAGGCCAAAGGTTTCTACTTCTGGGGTCTTAACTCAGCTTGCTTCGGTGAAAATGGAAGATAGTAGGGAGCTTAGCTTGTCAGGCCAGTTCTTGGGAAGCAATAATGTTCCAGCAAGTGATCAGCAGTATTGGACAGCTGCTGGCAATTCTTCAGCTTGGACTGATCTTTCTGGTTTTAGCTCTTCTTCCACTACTAGCAATCAACTATAG 1089 0.5243 MVFTSIPAAYLDAANWQQQQQPNHQPGNNNSASQQLLPPPPPPPPPAQPHGAGGAGSIRPGSMADKARMANLPMPETALKCPRCESINTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGSGSSNSPVSSDRQTGSASSTNSASSNSGSAADIVGLAPQMPPLRFMSPLHHQLTDFAAGDMALNYGLNYGTISGPVGGVGDLSFQMGNSLGAASGAGCGSSILSGAGLEQWRVPQTQQFPFLAGLEGSQAGGLYPFEGSAEVTGYGASGVSVSHHHVRPKVSTSGVLTQLASVKMEDSRELSLSGQFLGSNNVPASDQQYWTAAGNSSAWTDLSGFSSSSTTSNQL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1344 362 ProSitePatterns Zinc finger Dof-type signature. 81 117 IPR003851 GO:0003677|GO:0006355
Dod07g1344 362 ProSiteProfiles Zinc finger Dof-type profile. 79 133 IPR003851 GO:0003677|GO:0006355
Dod07g1344 362 MobiDBLite consensus disorder prediction 15 34 - -
Dod07g1344 362 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 12 358 - -
Dod07g1344 362 MobiDBLite consensus disorder prediction 15 62 - -
Dod07g1344 362 MobiDBLite consensus disorder prediction 123 166 - -
Dod07g1344 362 MobiDBLite consensus disorder prediction 35 50 - -
Dod07g1344 362 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 358 IPR045174 GO:0003700|GO:0006355
Dod07g1344 362 MobiDBLite consensus disorder prediction 133 166 - -
Dod07g1344 362 Pfam Dof domain, zinc finger 78 133 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1344 Dod-Chr7 36557279 36558916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1344 1 355 C2C2-Dof Transcription Factor Family AT2G37590 37.760 3.68e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod07g1344 zf-Dof 2.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1344 - - aip:107628427 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1344 07 36557279 36558916 Dod07g1344 07 36557279 36558916 ECH