Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0316 ATGGAGAGTGTGTGGAAGCCTAATGTGGAGATATCACCAAATTGCCCTAGGTGTGGCTCCTCCAACACCAAGTTCTGCTACTACAACAACTATAGCTTAACTCAACCAAGGTACTTTTGCAAGGGCTGCAGAAGGTACTGGACAAAAGGAGGGTCCCTCCGCAATGTTCCTATTGGTGGTGGATGCCGCAAAAATAGAAGAAGTAACAAGGCCTTTAGACAATCCATTGATGGTCTCAATTTCAAGAATTCACCTTGTGGTGTTGGTGACGCAACAAATAATAACTCAATTGGTCATTCTTATGATCCTAGAAGGACTAATTCACCTTCTTGCTCTTCGTCAGTGGTGGCTGATGGACCAAACATTGATCTTGCACTAGTTTATGCCAATTTCCTCAATCAAAGGCCAGATTCTGGAGATGGAGTGGTTGAGAATTCAGATCAAATGCAACAACCAATTTTTGATCCAATGGGAAATTCAAGGCTATCCAACATAGAAGGTGGACCAAGTACTACTTTGCATGAAGAATTTGGCCTTAATGGGTGTATAAATCTTCCTGAACAACCATTATCCACAGAACCCAATTTTCGTGAGGGCAATAGTAACCAAATGTATTTAAGTGGGTTCAACTCTATGCAGGTGCATCAAAAGGGTAGAATTGAGCAATTTAGTAGTCATGATAGTAACATCAATTTTGAGTTGCCACCATTGCCAGGTGATGAAGAAGCCTCACATGATTTGATGTGGTCAAATCCTGATATGATGGTGAACCATGCCTTTGAAGCCACACAACCACCACTCTTTGGAACTGAAGCCCATGATGCAGACTTGTTAATCGGTAATTGGAGCTCCTTTGATTTGCCAAGGGATGCTTCTTTTTCTAGGCCTTGA 891 0.4209 MESVWKPNVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKNRRSNKAFRQSIDGLNFKNSPCGVGDATNNNSIGHSYDPRRTNSPSCSSSVVADGPNIDLALVYANFLNQRPDSGDGVVENSDQMQQPIFDPMGNSRLSNIEGGPSTTLHEEFGLNGCINLPEQPLSTEPNFREGNSNQMYLSGFNSMQVHQKGRIEQFSSHDSNINFELPPLPGDEEASHDLMWSNPDMMVNHAFEATQPPLFGTEAHDADLLIGNWSSFDLPRDASFSRP* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0316 296 ProSitePatterns Zinc finger Dof-type signature. 15 51 IPR003851 GO:0003677|GO:0006355
Dod07g0316 296 ProSiteProfiles Zinc finger Dof-type profile. 13 67 IPR003851 GO:0003677|GO:0006355
Dod07g0316 296 Pfam Dof domain, zinc finger 14 67 IPR003851 GO:0003677|GO:0006355
Dod07g0316 296 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 292 IPR045174 GO:0003700|GO:0006355
Dod07g0316 296 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 1 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0316 Dod-Chr7 3926576 3927466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0316 4 291 C2C2-Dof Transcription Factor Family AT3G52440 37.500 1.57e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod07g0316 zf-Dof 3.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0316 - - gmx:100794208 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0316 07 3926576 3927466 Dod07g0316 07 3926576 3927466 ECH