Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2697 ATGCAAGACCCAACAACAGCATTCCAAGTCCAAGCCATGAAGCTCCCTAATCACTTTCCAGAACTGGAACAGCAACTCAAGTGCCCGCGTTGTGACTCCACAAACACCAAGTTCTGCTACTACAACAACTACAACCTCTCTCAGCCACGCCATTTCTGCAAGAACTGCAGAAGGTATTGGACCAAAGGTGGTGCTTTGAGGAACATCCCGGTCGGTGGTGGATCCAGAAAATCCAACAAAAGATCATCATCAACAACAACATCATCATCAAGCACCAAACGCCATGCACCACCACCATCATCATCATCACCTTTAGTTTCTTCATCAGCATCACATGTTACTTCTACTGCTACTAATACTAATACTATTGCTATTAAAACTTCCGGGTCTGACCCGACCCGGGTTGATCAAGATCGTAGGGTGATGAACATTGGAGGGAGCTTCAGTTCCCTTTTGGGATCAAGTGGACACTTTGGGACCCTTTTGGAGGGTCTGAATTCAAATGGGTCAGGGATGAAAATGGTGCAAGTGGGTGAATTTGATGGGAATTTTGGTTCTGACCCGGGTTTGAATTCGGGTTCGGATCGAAACCCGGGTTTTGATGTGCAGAGTAATGGAAACTCAGAGGGGTTTCTGGCTATGCAGCATGGTGATTCAAGCTGTTGGAATGGTGGTGGTGGCGGTGGTCATGGTTGGTCTGACCTTGCAATGTACACACCTAGCCCAAGCTTTCGGTAG 738 0.4743 MQDPTTAFQVQAMKLPNHFPELEQQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKSNKRSSSTTTSSSSTKRHAPPPSSSSPLVSSSASHVTSTATNTNTIAIKTSGSDPTRVDQDRRVMNIGGSFSSLLGSSGHFGTLLEGLNSNGSGMKMVQVGEFDGNFGSDPGLNSGSDRNPGFDVQSNGNSEGFLAMQHGDSSCWNGGGGGGHGWSDLAMYTPSPSFR* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2697 245 MobiDBLite consensus disorder prediction 75 131 - -
Dod06g2697 245 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Dod06g2697 245 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 14 244 - -
Dod06g2697 245 Pfam Dof domain, zinc finger 24 80 IPR003851 GO:0003677|GO:0006355
Dod06g2697 245 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
Dod06g2697 245 MobiDBLite consensus disorder prediction 67 137 - -
Dod06g2697 245 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 244 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2697 Dod-Chr6 57806031 57808571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2697 1 162 C2C2-Dof Transcription Factor Family AT1G51700 49.704 2.02e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod06g2697 zf-Dof 2.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2697 - - qlo:115988764 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2697 06 57806031 57808571 Dod06g2697 06 57806031 57808571 ECH
Dod10g1931 10 40966718 40969138 Dod06g2697 06 57806031 57808571 PCT