Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1841 ATGTCGTCGCCGGGGTTCACGGGCGCTGGACCCTCGGATTTCTTCTCCAGCGGAGCTTCAGGCTTTCCCGGCGGATCCATGGCGGCGGCACCACCACCAAACAATATCACCACCGCCCTAACCACCACCACCACCCAACTCCACCACACGCTCCACCCTTCTCACCCTCTCTACCGAACCCAGCAACAGCTCCCTGCAATCTTCCTCGATCCCTCTTCTTCCCAGCGCCAGACACCCTCCCTCGTCGGAAAGCGCACCCTCGCCGAGTTCCAATCCCACCAGAATCTCAACAACAACAACCACCACCACCACATCTACACCAACAACAACCTTAACCTCCACAACAACCATAACCAATTACTCTCCAACTTTCTACTTCGCTCTGTGAGGCAGAGGACTCTCTCTCCTCCTATGTGCTCTCTCTCTCACATGGATTTCTCAATCTCCCCAGAATTCCCAACCTCTTCTTCGGGCTTCCCGTCGCAGCGCTACGCCGTTCCCTTCCTGAGCCACCTCCGTCAAAACCCCGTTAACCTCACCAACGCCCGAATCCCATTACCCCTCACCAATTCCGTCCTCCAAAACACAAACAGATTACCACACCAATATCCAAATTTGTCTCAGGTTAACAGTAATAGCATCGTAGGACACGTCACCCACCACGAACAACCAGAGAAGAAGATTATGGACCATCGGCTTCAGGAGTTGGAGAAACAGCTCTTGGAAGATAACGACGACGAAGAAGGCGATGCGGTTTCCGTGATCACAAACAGCGAATGGTCAGAGACAATACAGAACCTGATTGATCCCGGGCCGGCTCAGGCCCAGGCCAAGCCCAGGCCCAGAATCTGTTGCTCCAAGCAATTGTTAATGGAGGCCGCGACGGCGATCTCCGAAGGGAAATTGGAGGTTGCGTCGGAGATCCTTTCCCGTTTGAGTCAATCTTCCAACCCTAATGGGAATTCGGATCAGAGGTTCACGGATTGCATGGTTTCGGCGCTGAAATCGCGAGTGAACCCGGTTGAGAATCCACCACCCGTGGCGGAGCTGTTCAGCAGGGAACACGCCGAGTCGACTCAGTTGCTCTTCGAGAACTGCCTCTGCTTCAAGGTCGCTCTAATGGCAGCCACCAACCACGCGATCCTCGAAGCCGCATTCGAGGACAAAGCGGAAAACGGCGTCAAGCTCTGCGTTGTGGATTTCGACGTCGGGAACGGGAAGCAACACGCGAGCCTCCTCCACGCTCTCTTCACGCGTCTCGCCGGGAAGCCAGCGACGGTGAAGCTCGCCGCTGTGGCAGAGAACGGCGGCGACGAGAGATTGAAGGCGGCGAGCGAGTTTCTGGAACGGCAAGCTGAGAGGCTCGGGATTAGTTTCGAGTTCAAGGTGGTGACTCACAACGAGTTGACTCGCGAGTCGCTTGGTTGCGACTCGGACGAGTCGCTGGCAGTGAATTTCGCGTTCAAGCTTTACCGGATGCCGGACGAGAGCGTCTCGACGGAGAACCCGCGCGACGAGCTTCTGCGGCGCGTGAAGGCACTCGCGCCGCGCGTGGTTATTTTGGTTGAGCAGGAGATGAACACCAACACGGCGCCGTTTGTTGCTCGCGTGGGCGAGTTGTGCTCGTATTACGGCGCGCTGTTTGACTCGGTTGAGTCGGCGCTGGCAAGGGACAACTCGGTGCGAGTCAAGGTGGAGGAAGGGCTGAGTCGGAAGGTGGGTAACTCGGTGGCATGCGAAGGGAGGGATCGCGTTGAACGGTGCGAGGTTTTCGGGAAGTGGCGCGCGCGAATGGGCATGGCTGGGTTCAGTCTCAAACCGGTGAATCCGAGCGTGGCCGAGTCAATCAAAGCGCGACTCGGTCCCGGGAACCGAGTCACCGTGAAGGAGGAAAACGGTGGCATTTGCTTTGGTTGGATGGGAAGGACACTCACCGTCGCATCTACTTGGCGTTAA 1956 0.57 MSSPGFTGAGPSDFFSSGASGFPGGSMAAAPPPNNITTALTTTTTQLHHTLHPSHPLYRTQQQLPAIFLDPSSSQRQTPSLVGKRTLAEFQSHQNLNNNNHHHHIYTNNNLNLHNNHNQLLSNFLLRSVRQRTLSPPMCSLSHMDFSISPEFPTSSSGFPSQRYAVPFLSHLRQNPVNLTNARIPLPLTNSVLQNTNRLPHQYPNLSQVNSNSIVGHVTHHEQPEKKIMDHRLQELEKQLLEDNDDEEGDAVSVITNSEWSETIQNLIDPGPAQAQAKPRPRICCSKQLLMEAATAISEGKLEVASEILSRLSQSSNPNGNSDQRFTDCMVSALKSRVNPVENPPPVAELFSREHAESTQLLFENCLCFKVALMAATNHAILEAAFEDKAENGVKLCVVDFDVGNGKQHASLLHALFTRLAGKPATVKLAAVAENGGDERLKAASEFLERQAERLGISFEFKVVTHNELTRESLGCDSDESLAVNFAFKLYRMPDESVSTENPRDELLRRVKALAPRVVILVEQEMNTNTAPFVARVGELCSYYGALFDSVESALARDNSVRVKVEEGLSRKVGNSVACEGRDRVERCEVFGKWRARMGMAGFSLKPVNPSVAESIKARLGPGNRVTVKEENGGICFGWMGRTLTVASTWR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1841 651 PANTHER SCARECROW-LIKE PROTEIN 8 76 650 IPR030013 -
Dod06g1841 651 ProSiteProfiles GRAS family profile. 277 651 IPR005202 -
Dod06g1841 651 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 76 650 IPR005202 -
Dod06g1841 651 Pfam GRAS domain family 287 651 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1841 Dod-Chr6 26422906 26426072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g1841 54 651 GRAS Transcription Factor Family AT5G52510 46.687 9.16e-154 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod06g1841 GRAS 1.6e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1841 - - aip:107644872 657.521