Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0228 ATGGCGAGCCATGCCTCATCATTCTCAAGCCTACGCGCATACCTACGCGTCCTCCCACACACCCCTTCCCGCTTCGCGCGCCGGGCCGTTTCGGTCTCCACCTCCTACGACGAGATGAGCCGGGTTCGTGCCCGCTCCGGCTCCGACATGCGCAAGACCCTCCGCTGGTACGACCTCGTCGCCCTCGGCATCGGCGGCATGGTCGGCGCCGGCGTCTTCGTCACCACTGGCCGCGCCACTCACCTCTACGCCGGCCCCGCCGTCCTCCTCTCCTACGCCATTGCCGGCCTCTGCGCCCTCCTCTCCGCCTTCTGCTACACAGAGTTCGCCGTCGACATGCCCGTCGCCGGCGGCGCCTTCAGCTACCTCCGCGTCACCTTCGGTGAGTTTGCGGCGTTTCTGACGGGAGCGAACCTCGTGATGGACTACGTGATGTCCAATGCGGCGGTTTCAAGAGGCTTCACCGCTTACTTAGGCACCGCAATCGGAATCTCCTCCGCGAAATGGAGGCTGACGGTGCCTTCTCTCCCCAACGGCTTCAACCAGATGGACCTCGTGGCCGTCGCAGTCGTCTTGCTCATCACACTGGTTATCTGCTACAGCACGAGGGAGAGCTCAGTGGTGAACATGATATTAACGGCGCTTCACATTCTGTTCATAGCGTTCGTGATACTAATTGGTTTCTGGGGAGGGAGTTGGAAGAATTTCACGGAGCCGGCAAACCCGGAGAAATACCCGTCCGGGTTCTTCCCGTACGGAGCTTCGGGCGTGTTTAACGGGGCGGCAATGGTGTACCTGAGTTACATTGGATACGACGCCGTTTCGACGATGGCAGAGGAAGTGAAGGATCCAGTGAAAGATATCCCAATCGGTGTGTCTGGATCGGTGGCGATTGTCACTGTCCTCTATTGCCTCATGGCCGCTTCTATGTCAAAGCTTCTCCCTTACGACATGATCAATGAAGAAGCGCCGTTTTCGGCGGCGTTCAGTGGGAGATCGGACGGCTGGGGATGGGTGTCGCGGGTGATAGGGGTGGGGGCCAGCTTCGGGATCTTGACGTCGCTGTTGGTGTCGATGCTGGGTCAGGCTCGTTACATGTGCGTCATCGGACGGTCCAGTGTGGTCCCTCCTTGGTTCGCTAGGGTCCACCCCAAGACCTCCACCCCTGTCAACGCCTCCGCTTTTCTTGGGATCTTCACGGCGGCAATTGCCCTTTTCACTGACCTGGATGTCCTGCTCAATCTGGTGTCCATTGGCACCCTGTTTGTGTTTTACATGGTGGCAAATGCAGTGATCTATAGACGTTATGTGGTTATCGGGACAACCAATCCATGGCCTACACTGTCCTTTCTCTGCTCATTTACCTTTACCTCCATATTGTTCACCCTTATTTGGAAAATGGTACCCACAGGAAGGGCTAAAGCTGGTATGCTCAGTGCTTGTGCTGTGATTGCCGTTGCAATATTACAACTTTTCCATTGCATGGTCCCGCAGGCCCGGAAGCCAGAGTTCTGGGGTGTCCCACTCATGCCATGGATACCCTCCATATCAATATTTCTCAACGTGTTCTTGCTTGGGTCACTTGATGGGCCATCCTATGTTCGGTTTGGCTTCTTTTCGGCTCTTGCAGTGCTTATCTATGTCTTTTACAGCGTCCATGCTAGCTTTGATGCTGAAGGAGATGGTTCCCTTACTCAAAAGAATATTGCTGAAATAATCCACGTGGAATCAAAAGAATGTGAGGATCAAAATTTCAAAGTGTAG 1764 0.5539 MASHASSFSSLRAYLRVLPHTPSRFARRAVSVSTSYDEMSRVRARSGSDMRKTLRWYDLVALGIGGMVGAGVFVTTGRATHLYAGPAVLLSYAIAGLCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFLTGANLVMDYVMSNAAVSRGFTAYLGTAIGISSAKWRLTVPSLPNGFNQMDLVAVAVVLLITLVICYSTRESSVVNMILTALHILFIAFVILIGFWGGSWKNFTEPANPEKYPSGFFPYGASGVFNGAAMVYLSYIGYDAVSTMAEEVKDPVKDIPIGVSGSVAIVTVLYCLMAASMSKLLPYDMINEEAPFSAAFSGRSDGWGWVSRVIGVGASFGILTSLLVSMLGQARYMCVIGRSSVVPPWFARVHPKTSTPVNASAFLGIFTAAIALFTDLDVLLNLVSIGTLFVFYMVANAVIYRRYVVIGTTNPWPTLSFLCSFTFTSILFTLIWKMVPTGRAKAGMLSACAVIAVAILQLFHCMVPQARKPEFWGVPLMPWIPSISIFLNVFLLGSLDGPSYVRFGFFSALAVLIYVFYSVHASFDAEGDGSLTQKNIAEIIHVESKECEDQNFKV* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0228 587 Pfam Amino acid permease 55 486 IPR002293 GO:0016020|GO:0022857|GO:0055085
Dod06g0228 587 Gene3D Amino acid/polyamine transporter I 49 474 - -
Dod06g0228 587 Pfam C-terminus of AA_permease 505 555 IPR029485 -
Dod06g0228 587 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 3 576 - -
Dod06g0228 587 PANTHER AMINO ACID/POLYAMINE TRANSPORTER I, CATIONIC AMINO ACID TRANSPORTER-RELATED 3 576 - -
Dod06g0228 587 PIRSF AA_transporter 37 504 - -
Dod06g0228 587 PIRSF AA_transporter 491 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0228 Dod-Chr6 3268194 3271729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0228 141 576 Organic Solute Cotransporters AT3G10600 75.459 0.0 679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0228 06 3268194 3271729 Dod06g0228 06 3268194 3271729 ECH