Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0210 ATGGGTCCTCTGCTTTTCGTGCTCTTCACATTCTGGTCTTCCCCATTAGCACAATCTCGCACCACACCCCACATTCTAAAAGCCACAATACTAGACATTACTGCTTCCATTCAAAAAACCCACCAAGTTCTCAACTTCAACCACCACCATCAACAACAACTGAGTTCTTCTTCTTCTTCTTCTTCTTCTTCACCATCAAGGCTTTCTCTGCAACTGCATTCTCGAGCATCACTTCAGAAACCTTCACACCGCGACTACAAATCCCTAACACTATCCCGACTCGAGCGTGACTCAGCCCGAGTCAGGTCCCTCGTGACTCGTTCATCCCAAAACTACTCCTTCGGTGCATCGGAATTACAAGGACCCATCATCTCCGGAACGAGTCAAGGAAGCGGCGAGTACTTCTCCAGAGTCGGAATCGGCGAGCCACCGACACCGGCGTACATGGTCCTCGACACCGGCAGCGACATCAGCTGGGTGCAATGCGCACCCTGCTCCCGCTGCTACCGCCAATCCGACCCCATCTTCGAACCCTCCTCTTCCTCTTCCTATTCCCCGCTTCCCTGCGAGTCGACTCAGTGCGAATCGCTCGACCAATCGCAGTGCCGCAACGGTAACTGCAATTACATGGTCTCCTACGGCGACGGTTCCTACACCGTCGGCAACTTCGTCACCGAGACCATCACCTTCGGCGAAACCTCCGTCAGAAACATCGCCATCGGCTGCGGCCACGACAACGAAGGTTTGTTCGTCGGCGCCGCCGGATTACTCGGCCTCGGCGGCGGAACCCTATCTTTTCCTGCTCAGCTCAATTCGAAGTCGTTTTCGTACTGCCTCGTGGATCGCGACTCTGACTCGGTCTCGACTCTCGAGTTTGACTCGCCGTTCCCTCGTGACGCCGTTACCGCGCCGCTACGGCGGAGTTCGCAGCTCGACACTTTTTATTACGTAGGGCTTGAAGGGATCAGTGTAGGAGGCGAGTTGCTCCCGATTCCGGCGTCGAGTTTTCAGCTGGATCCAGCAACCGGCAGCGGAGGGATCATTGTGGATTCCGGCACGGCGGTGACGCGGTTGCGGAGAGATGTTTATGATGTTCTGAGGGATGCGTTTGTGAGTGGCACGAGGGATTTGCCGGCGGCGAACGGCGTGTCGTTGTTTGACACGTGCTACGACTTGTCGTCGAGGACGAGCGTTGAGGTGCCCACGGTTTCGTTTCACTTTCCCGAAGGGAAGGTGTTGGCTTTGCCCGCGAAAAATTACCTGATACCGCTGGACTCGGTTGGGACATTCTGCTTTGCGTTCGCTCCCACGAACTCGGCGCATGTCGATTATTGGGAACGTTCAGCAGCAGGGGACACGTGTCAGTTTCGATCTCGATAA 1380 0.5543 MGPLLFVLFTFWSSPLAQSRTTPHILKATILDITASIQKTHQVLNFNHHHQQQLSSSSSSSSSSPSRLSLQLHSRASLQKPSHRDYKSLTLSRLERDSARVRSLVTRSSQNYSFGASELQGPIISGTSQGSGEYFSRVGIGEPPTPAYMVLDTGSDISWVQCAPCSRCYRQSDPIFEPSSSSSYSPLPCESTQCESLDQSQCRNGNCNYMVSYGDGSYTVGNFVTETITFGETSVRNIAIGCGHDNEGLFVGAAGLLGLGGGTLSFPAQLNSKSFSYCLVDRDSDSVSTLEFDSPFPRDAVTAPLRRSSQLDTFYYVGLEGISVGGELLPIPASSFQLDPATGSGGIIVDSGTAVTRLRRDVYDVLRDAFVSGTRDLPAANGVSLFDTCYDLSSRTSVEVPTVSFHFPEGKVLALPAKNYLIPLDSVGTFCFAFAPTNSAHVDYWERSAAGDTCQFRSR* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0210 459 PANTHER ASPARTYL PROTEASES 10 439 IPR001461 GO:0004190|GO:0006508
Dod06g0210 459 SUPERFAMILY Acid proteases 128 442 IPR021109 -
Dod06g0210 459 Gene3D Acid Proteases 295 452 IPR021109 -
Dod06g0210 459 Gene3D Acid Proteases 105 292 IPR021109 -
Dod06g0210 459 MobiDBLite consensus disorder prediction 49 84 - -
Dod06g0210 459 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 10 439 - -
Dod06g0210 459 Pfam Xylanase inhibitor C-terminal 315 437 IPR032799 -
Dod06g0210 459 MobiDBLite consensus disorder prediction 49 77 - -
Dod06g0210 459 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 149 160 IPR001969 GO:0004190|GO:0006508
Dod06g0210 459 Pfam Xylanase inhibitor N-terminal 134 291 IPR032861 -
Dod06g0210 459 ProSiteProfiles Peptidase family A1 domain profile. 134 459 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0210 Dod-Chr6 3048415 3050334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0210 124 434 Miscellaneous Gene Families AT1G77480 27.221 4.06e-21 93.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0210 06 3048415 3050334 Dod06g0210 06 3048415 3050334 ECH