Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0207 ATGCAAAGCTTCAAGACAACTCAATCAAGCCCAAGACTCTATTGCCACTACCCCTTCTTGCTTCGGGGAGACGAAACCAGCCGAAATCCCACGCGTTTCTCTGACCTTGCGGAGCTTCAACATTCCGCTGCTGTATTTCAACAACACGATGCTGTTGATTTAAGCTCAAACTCTGCGTTCAGTGTAAAGTCGAACAATGTAGCTGCTGTTGCAAGTGACTTGCAGTATGGGACATTCAACACCTACCTTGGGCCTGCAGATGTTGCTTCAACAGGGGCAGGGTACATTGAAACAGGGCAGCATCATATGTTCCAGAAGGAGAACACTATCGCTACCGTGCCACTCGGGAGCGCGCATATTGAGAATTGGAGTGAATCAGCCATGGCTGACAATAGCCAACAGACTGATGATGCTTCCACAGATATCGACACCGATGATAAGAACCAGTGCCATAGAGTTGGGCATGAGGCAGTTGCAGTTGTGGACTCCAAGGATCAAAGTAAGGTTAAAGCTGAAGACCAGAAGACTCTTCGTAGGTTGGCTCAGAATCGGGAGGCTGCAAGGAAGAGTCGATTAAGGAAAAAGGCATATGTGCAGCAATTGGAGAACAGTCGAGTAAGGCTTGTGCAATTAGAGCAGGAGCTTCAACGAGCACGTCAGCAGGGTGTATTTGTTGCAAACGAATCTGCAGGGGATAATGGTCGTTCGGTTGTTGGAAATGGTGCATTAGCATTCGACATGGACTATGCTCACTGGGTTGAAGAGCATCAACGTCTGATCAACGACCTAAGATCAGCTGTAAACTCTCATATGGGTGATAACGAACTGAATCTTCTTGTTGATGGTGTCATGGCGCATTATGACCAACTATTTCGGTTAAAGAGCACAGGGGCAAAGGCCGATGTATTTCACATACTCTCTGGGACATGGAAGACACCTGCTGAAAGATGCTTCATGTGGCTTGGTGGATTCCGTTCATCTGAACTTCTCAAGATAGTTAGAAACCAGCTTGAGCCGTTAGCAGATCAGCAGTTGATGGGCATTTATAATCTGCAGCAGTCTTCTCAGCAGGCTGAGGATGCTCTATCTCAAGGCATGGAAGCACTGCAACATTCTCTCTTAGAGACACTTTCCTCCACCTCTCTAGGCCCCACTGGCTCTGGAAATGTTGCTCAGTACATGGGCCTAATGGCAATTGCAATGGGGAAGCTTGCCACTCTTGAGAATTTCCTTCATCAGGCTGACCTATTGAGGCAACAAACACTGCAACAGTTGCAACGAATTTTGACCACGCATCAAGCTGCTCGTGCTCTCCTAGTCATAAATGATTACAGTCTCACGACTACGAGCGCTTAG 1356 0.4749 MQSFKTTQSSPRLYCHYPFLLRGDETSRNPTRFSDLAELQHSAAVFQQHDAVDLSSNSAFSVKSNNVAAVASDLQYGTFNTYLGPADVASTGAGYIETGQHHMFQKENTIATVPLGSAHIENWSESAMADNSQQTDDASTDIDTDDKNQCHRVGHEAVAVVDSKDQSKVKAEDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRVRLVQLEQELQRARQQGVFVANESAGDNGRSVVGNGALAFDMDYAHWVEEHQRLINDLRSAVNSHMGDNELNLLVDGVMAHYDQLFRLKSTGAKADVFHILSGTWKTPAERCFMWLGGFRSSELLKIVRNQLEPLADQQLMGIYNLQQSSQQAEDALSQGMEALQHSLLETLSSTSLGPTGSGNVAQYMGLMAIAMGKLATLENFLHQADLLRQQTLQQLQRILTTHQAARALLVINDYSLTTTSA* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0207 451 PANTHER TRANSCRIPTION FACTOR TGA9 46 445 - -
Dod06g0207 451 Pfam bZIP transcription factor 174 212 IPR004827 GO:0003700|GO:0006355
Dod06g0207 451 MobiDBLite consensus disorder prediction 127 147 - -
Dod06g0207 451 SUPERFAMILY Leucine zipper domain 175 218 IPR046347 GO:0003700|GO:0006355
Dod06g0207 451 Pfam Seed dormancy control 260 334 IPR025422 GO:0006351|GO:0043565
Dod06g0207 451 Gene3D - 174 223 - -
Dod06g0207 451 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 217 IPR004827 GO:0003700|GO:0006355
Dod06g0207 451 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Dod06g0207 451 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 46 445 - -
Dod06g0207 451 Coils Coil 194 228 - -
Dod06g0207 451 SMART brlzneu 171 229 IPR004827 GO:0003700|GO:0006355
Dod06g0207 451 CDD bZIP_HBP1b-like 175 226 - -
Dod06g0207 451 ProSiteProfiles DOG1 domain profile. 242 451 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0207 Dod-Chr6 3020035 3023433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0207 3 444 bZIP Transcription Factor Family AT1G68640 55.507 3.49e-151 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod06g0207 DOG1 6.3e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0207 06 3020035 3023433 Dod06g0207 06 3020035 3023433 ECH