Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0201 ATGGCCACCGATTCCCACGACTCTCGTCGCAAGCATCGCCGATCGTCCTCCCCCGAGGACGCGGAGCGATCCTCTAAGCGCCATAAGCACCGCCACCACAGCCACCGCCACCGCCACGGTAGCAAAAAGCGCGACGAAGACAGCGAATACGATGGCGGAACAGTCGCTAGGGTTCATTCTCCAGCTCCCGCACCTAATCCTGCTCCGTATAGCTCTCTCCCCGATGACGACGTGGAGGAAGGAGAGATTCTCGAAGACGGCGAGATTGCGAAGAAGGATACGGAATCCGATGCAGAACCTGGTGAAATTGAGGTGACAGGAGATCGAGATGTTCGATCGAATAAGAAAATACTGGGACTTCTCACTAAAAATTCAAAAACTGAAAGCGAGGACATTAGTGATGGTAAAACTGTTAGTCCTGTATTGGATGCAGATGGGAGTGGGGCATGGCGTCCTGGACTTCATGATGATGAGGGTTCTCCTAATCAATCAAGGCCTGAGCCTCGAGATGGAAAGGATGCCAGAGCTACTAAAGATGGCGTGGGCAATGGGTATTTGAATCCTAAATCATCCAAAGGAGATAAGAGGCAGAATGAGGAACTTGGACATTTGAATAGAAATGAGAAAAGAAAAGATGACTATGGTGATGAAGCACTAGAGGCAAATGGAAGGAAAGCAAATTACCATAGAAATTCATCATCTGAAAGTGAAGGCGAAAAATACAGAATGTCTAGAAGCTCTCCCTCTCATGATAGATATAGAAGTCGATCAAGATCAACTGGTCATACTAGGGACAGATCACATTCTCGTAGTATAGTCGATGAATATGCTCATTCGAAGAGAAGGCACTCTAGGGAACAAGGTTCACTTCATTATACTGGCAGACATAAGACAGAACTGGACCTTGATGAGGAAAGAATAAGAGCACGTGGAAGGGAGCATGGTCGTGACGGCATGAATTTGGTGGTAGATGATAGAAGGGGACACAGTATCAGATATCACAGTTGGGAGGCCCACGATAGGGATAGAGACCTATACAGGGAAAAGAAACAAGAGGAAGAAAGCAGGAATAGGGAGGTTGATCGAGCGCGTAGAACAGAAAAAGAACGTGAAAGGAGCCATGAGAGGGACAGAAGGGATGTAGCAAAAGATAGAAGCAGGGAAAGGGAGGACAGGGATAGAAGACGAGAAAGGGAAAGGGGTAAGAGCTGGGAGACAGATTTTGAGAGGGATAGAAGAAGGGGAAAGGAAAGAGATAGGAGTAGGGACAGAACACGAGGTGTTGAGAGAGATAGAGACCGTGAGAGTGAAAGGAATGATAAGAATCGGGAAAGGGATAGTCGGGATGATAGACATAGGCACGTGGACAGAGACACTGCAAATAGTGGGGATAAACATCTGCGTCATGAGGATGGTGATGACGGTCGAGATAGATATAGATATAGAAAACATTCAAGACAAGAACAAACTGAATACCACCGGGAGAGAAAAAGAAATTCTGGTCCTGTAAAGGTTTATAACTCTGTGGGAAGTACTGCAGAACAGGATGAAAGCAAGCTAGAAAGAGGTGAGGTTGAACCAGATGACTTAGATGAGGATGCATTGCAATTACCTGAACAAGAAGAGGAAGATCTTAATAAGATTAAAGAGGAGAGTAGAAGGAGAAGGGAAGCGATAATGGAGAAATACAAGAAGAAGCATCAGCAAGCAGAACAAGTGGTTGAAGATGAACAAAAAAATAAGGAACCTTTGGACATTCCTACTGGCATTCCTGAAGCGCATGACAGTAAGAATGATGGTGTTGATGATGGGGAAACATCATTTGCTGTTGGGAAATCTCCTCCTGAAAATTTGAATGTTGCTTCTAACAAGATATCAGGTGCTGGGGGCCTTGGAGAGGGTACTCCTAAGAGTGAGAGATCAGATGACAAGTATTGTGATGATATATTTGGTGAGACACCAACTGGAGTTCGGAAATCAGGAAAAGGAGATGGTATACTTATTGAAAAGGTTGGCTTACATGACAATTGGGATGATGCAGAGGGGTATTACAGCTATCGTTTTGGTGAAATACTTGATGGCCGATATGAAGTCACTGCTGCACATGGGAGGGGTGTTTTTTCAACAGTTGTTCGGGCAAAGAATCTTAAGATTGGTAATGGTGAGCCAGAAGAAGTAGCTATCAAAATTATTCGTAATAATGATACCATGTACAAGGCTGGTATGGATGAGTTGGTCATATTAAAGAAACTAGTAGGTGCAGACCCGGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTGCGTGAAGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTTACCGCTGTGAGAGCATATGCAAAACAACTTTTTATCGCTCTGAAGCATCTTCGGAACTGTGGTGTTCTTCATTGCGATATAAAGCCAGACAATATGTTGGTGAATGAGGCTAAAAATGTGTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGCAAGAATGAAGTTACACCATATCTTGTGAGTCGGTTTTATCGTGCTCCTGAAATAATTCTTGGCTTGCAGTATGATCATCCGTTGGATATTTGGTCTGTTGGCTGTTGTTTGTATGAACTCTATACAGGGAAAGTTCTTTTTCCAGGGCTTACAAACAATGACATGCTTAGGCTTCACATGGAATTGAAGGGCCCTTTTCCAAAGAAGATGCTGCGTAAGGGAGCATTTACTGAACAACATTATGATCAGGACCTGAATTTTCTTGCTACTGAAGAGGATCCTGTAACCAAAAAGACGATAAAGCGGATGATTCTCAACATAAAGCCAAAAGATATTGGAGCAATTGTCACAGGCTCTCCTGGGGAGGATCCAAAGATGCTAGCCAACTTCAAGGATCTTCTAGATAAAATTTTTGTCTTGGACCCAGACAAGAGGTTGACAGTATCCCAAGCATTGAACCACCCATTTATCACTGGCAAGTGA 3045 0.4371 MATDSHDSRRKHRRSSSPEDAERSSKRHKHRHHSHRHRHGSKKRDEDSEYDGGTVARVHSPAPAPNPAPYSSLPDDDVEEGEILEDGEIAKKDTESDAEPGEIEVTGDRDVRSNKKILGLLTKNSKTESEDISDGKTVSPVLDADGSGAWRPGLHDDEGSPNQSRPEPRDGKDARATKDGVGNGYLNPKSSKGDKRQNEELGHLNRNEKRKDDYGDEALEANGRKANYHRNSSSESEGEKYRMSRSSPSHDRYRSRSRSTGHTRDRSHSRSIVDEYAHSKRRHSREQGSLHYTGRHKTELDLDEERIRARGREHGRDGMNLVVDDRRGHSIRYHSWEAHDRDRDLYREKKQEEESRNREVDRARRTEKERERSHERDRRDVAKDRSREREDRDRRRERERGKSWETDFERDRRRGKERDRSRDRTRGVERDRDRESERNDKNRERDSRDDRHRHVDRDTANSGDKHLRHEDGDDGRDRYRYRKHSRQEQTEYHRERKRNSGPVKVYNSVGSTAEQDESKLERGEVEPDDLDEDALQLPEQEEEDLNKIKEESRRRREAIMEKYKKKHQQAEQVVEDEQKNKEPLDIPTGIPEAHDSKNDGVDDGETSFAVGKSPPENLNVASNKISGAGGLGEGTPKSERSDDKYCDDIFGETPTGVRKSGKGDGILIEKVGLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGRGVFSTVVRAKNLKIGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLQYDHPLDIWSVGCCLYELYTGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTEQHYDQDLNFLATEEDPVTKKTIKRMILNIKPKDIGAIVTGSPGEDPKMLANFKDLLDKIFVLDPDKRLTVSQALNHPFITGK* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0201 1014 Gene3D Phosphorylase Kinase; domain 1 666 755 - -
Dod06g0201 1014 ProSiteProfiles Protein kinase domain profile. 696 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0201 1014 PANTHER DUAL SPECIFICITY PROTEIN KINASE 293 1014 - -
Dod06g0201 1014 Coils Coil 343 369 - -
Dod06g0201 1014 MobiDBLite consensus disorder prediction 26 40 - -
Dod06g0201 1014 Coils Coil 560 580 - -
Dod06g0201 1014 MobiDBLite consensus disorder prediction 1 25 - -
Dod06g0201 1014 CDD STKc_PRP4 695 1011 IPR044092 GO:0004674|GO:0006468|GO:0045292
Dod06g0201 1014 MobiDBLite consensus disorder prediction 540 583 - -
Dod06g0201 1014 MobiDBLite consensus disorder prediction 158 177 - -
Dod06g0201 1014 MobiDBLite consensus disorder prediction 85 116 - -
Dod06g0201 1014 SUPERFAMILY Protein kinase-like (PK-like) 683 1013 IPR011009 -
Dod06g0201 1014 Gene3D Transferase(Phosphotransferase) domain 1 756 1012 - -
Dod06g0201 1014 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 293 1014 - -
Dod06g0201 1014 Pfam Protein kinase domain 698 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0201 1014 MobiDBLite consensus disorder prediction 192 501 - -
Dod06g0201 1014 SMART serkin_6 696 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0201 1014 MobiDBLite consensus disorder prediction 1 644 - -
Dod06g0201 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0201 Dod-Chr6 2967975 2976258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0201 703 1012 MAP Kinase Gene Family AT4G01370 33.856 4.88e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Dod06g0201 Pkinase 2.5e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0201 06 2967975 2976258 Dod06g0201 06 2967975 2976258 ECH