Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0199 ATGTACGAGGATTCCAGAGGCAACAAGATGGTTGTGGCACGATGGTTTCACAAAATTGATGAGGTTGGTATTGATTTGCCTCACAGTTTTTGTGAGAGAGAGCTTTTCGTTTCTCTTTATCTTCAAGATCTGAGTATTGAATGCATAGATGGATTGGCTACCGTCCTCAGTCCGCAGCATTATGAAAAGTTTCAGTCTAGTGGCAGATATACTCGTTGGGAGCCATTCATGTGCAGCAAACAGTTTGATAATGATGATGTCAAACCCTTTGATGTGACTCAACTCAAGGGTTATTCAAAACAAGAAATAATCAGATTCATGTATACCGTTTCTGAATCAAAGTCTAATGGGAGTTCTGGCCTTTCTGACGATAGCCAAGAGAACCTCCATCCTACTGCTGGGATCAGACCTAAGAAGAGGCGGCGCTTGACAAAAGTTGGTGGCAAAGATGCATCTGATTTAGCTGCTGTTAAATTGGAAAATTTGAGTAATAATAGGACTGATACCAAGGTCAGTACTGTGAACAGTCCCTTGAACAAGGATGCTGATCACTATTTAGTTATAGGTTCCCAAGTTGAGGTTCTCTCACAGGACAGTGGAATCAGAGGCTGTTGGTTTAGAGCCTCTATTGTTAAGAAGCACAAAAATAAAGTGAAGGTGCAATATCAAGACATCCAGGATGCAGTTGACGAAACTAAGAAGCTTGAGGAATGGGTCTTAGCTTCCAGAATTTCAGGTTATGATCATCTGGGTCTCCATATGTCTGGGAGGGCTAAGATTCGGCCAGCCCCGCCATCTCATAAATTTGAAAAATCCTTGGATGTTGATGTTGGTTCCATTGTTGATGCGTGGTGGCATGATGGGTGGTGGGAAGGCATTATTGTTGAAATAGAGTCTGAGGCTAAATATCATGTTTATTTCCCAGGGGAAAGGTTGGTGTCAGTGTTTGGTCTTGATAACTTTAGGCCTTCTCAAGAATGGACAGGGAATGACTGGTTGAATGTGAGGGAGAGGCCTGACCTTGTGACTTACGTATTGTCAACCTTAAAAACACAAGAAGATCCCAGCAAATCACATGACAGCAAATCGACTGTATTGTCTACTGGAGAAGATGTCATACAATCAAAGCAGGGTGATGCCTGCTTGGATTCTGAAAAGGATAAACCCAGGAAGTCTGATGTTTTCCCCGACCTTTTGAAGGATGACATGCTTTCTCAATTACGGTGGAAGTCATCCAGGAAGAGGAGACGTGGCAGTGGTAGCTCTTGCGGGAAGCAACAAGGCGATGACAAGGATAGGAAAAAGTCACCAAATGCTCTGGAATCTGATACTTCTGATGGATTTGTGATTCCAGCATCTGTGAATACAGAACATGACGACTTCAAGTATATGGGGGATCCTTCCATTTTCAGCTCTTCAGTTGTCCCTTCTTTAACTAACTTGGTTATGTGTAGGTAA 1458 0.4273 MYEDSRGNKMVVARWFHKIDEVGIDLPHSFCERELFVSLYLQDLSIECIDGLATVLSPQHYEKFQSSGRYTRWEPFMCSKQFDNDDVKPFDVTQLKGYSKQEIIRFMYTVSESKSNGSSGLSDDSQENLHPTAGIRPKKRRRLTKVGGKDASDLAAVKLENLSNNRTDTKVSTVNSPLNKDADHYLVIGSQVEVLSQDSGIRGCWFRASIVKKHKNKVKVQYQDIQDAVDETKKLEEWVLASRISGYDHLGLHMSGRAKIRPAPPSHKFEKSLDVDVGSIVDAWWHDGWWEGIIVEIESEAKYHVYFPGERLVSVFGLDNFRPSQEWTGNDWLNVRERPDLVTYVLSTLKTQEDPSKSHDSKSTVLSTGEDVIQSKQGDACLDSEKDKPRKSDVFPDLLKDDMLSQLRWKSSRKRRRGSGSSCGKQQGDDKDRKKSPNALESDTSDGFVIPASVNTEHDDFKYMGDPSIFSSSVVPSLTNLVMCR* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0199 485 MobiDBLite consensus disorder prediction 380 395 - -
Dod06g0199 485 Pfam Agenet domain 189 265 IPR008395 -
Dod06g0199 485 MobiDBLite consensus disorder prediction 116 147 - -
Dod06g0199 485 Gene3D - 1 112 IPR043151 -
Dod06g0199 485 MobiDBLite consensus disorder prediction 409 451 - -
Dod06g0199 485 PANTHER AGENET AND BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 484 - -
Dod06g0199 485 MobiDBLite consensus disorder prediction 352 395 - -
Dod06g0199 485 ProSiteProfiles BAH domain profile. 1 93 IPR001025 GO:0003682
Dod06g0199 485 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 1 484 - -
Dod06g0199 485 SMART agenet_At_2 184 250 IPR014002 -
Dod06g0199 485 SMART agenet_At_2 273 329 IPR014002 -
Dod06g0199 485 MobiDBLite consensus disorder prediction 426 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0199 Dod-Chr6 2952042 2953725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0199 184 327 PHD Transcription Factor Family AT5G58610 25.828 4.38e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0199 06 2952042 2953725 Dod06g0199 06 2952042 2953725 ECH