Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0196 ATGGCTTCTTCTCCATTCCTCTCCGGCAACTCCTCCTCCACCCTCTCATTCTCCTCATCCCTCTCTTCTTCTTCTTCTTCTTCTTCAGCCACCCTCCTCCCATGCCGCCGCCGCGCCATCCTCCCACTCCCTCGGCGCTGCTCATCCTCATTCTCCGTCAAATCCAAGATCCGAGAAATCTTCATGCCCGCCCTCAGCTCCACCATGACAGAGGGCAAGATCGTCTCCTGGATCAAATCCGAAGGCGACACCCTCTCCAAGGGCGACAGCGTCGTCGTCGTGGAGTCCGACAAGGCCGACATGGACGTTGAGACCTTCTACGACGGCATCCTAGCCGCCATCGTTGTCCCCGACGGCCAGGCCGCCCCTGTCGGAGCCCCCATCGCCTTCCTCGCCGAGTCCCAAGAAGAACTCGCCGAAGCCAAAGCCAAAGCCGCCAAATCCCAATCCAACTCTGCTTCTTCTTCTCCTTCCGTCGCTTCCGAAACCTCAAATCCAGCTCCGGCCATGTCTCAGCCGCTGCCGCCGCCGCCTGCGGTGGTTTCCGACGAGCCGAGGAAAGCCGTGGCCACGCCTCAGGCGAAGAAGCTCGCGAAGCAGCACAAGGTCGACATTGCGTCGGTTGTTGGGACCGGTCCCTTTGGAAGGATTACTCCGGCGGACGTGGAGGCCGCTGCCGGGATTGCGCCGTCGAAGAGTAATGTAGCTACTGCGGCGGCTCCTTCTCCGGTGACTTCTGCTCCGCCGAAAGCTGCTTCTGGTGGTGGTGGTGGTGCGGTGGCGCCGCCTCCGGTTCCGGGCTCTAGTGTTGTTCCTTTCACGACGATGCAATCTGCGGTTGCGAAGAACATGGTGGAGAGTCTCTCTATTCCTACGTTCCGTGTTGGGTATCCTGTCACTACTGATGCACTCGATGCTCTCTATGAGAGGGTGAAACCGAAGGGTGTGACTATGACAGCGATTTTGGCCAAGGCTGCTGCAGCGGCGCTTGTTCAGCATCCTGTTGTCAATGCCAGCTGCAAAGACGGCAAGAACTTTGCCTATAACAGTAACATCAACATTGCTGTTGCTGTGGCAATCAATGGTGGTTTGATCACCCCTGTACTCCAGGATGCGGATAAGTTGGACTTGTATCTGTTGTCCCAGAAGTGGAAAGAGCTGGTGGATAAAGCTCGTGCAAAGCAATTGCAACCTCACGAGTACAATTCAGGAACTTTCACGCTTTCCAATTTGGGCATGTTTGGAGTTGACAGATTTGATGCCATACTTCCCCCAGGACAGGGGGCTATCATGGCTGTTGGAGCATCAAAGCCTACTGTTTTGGCTGATGCAGATGGATTCTTCAGGGTGAAAAATAAAATGCTGGTGAATGTAACAGCTGATCACCGAATAATTTATGGAGCTGACTTGGCCGCCTTCCTCCAGACATTCTCAAAAATCATCGAAAACCCAGAAACTCTAACATTATAG 1470 0.5503 MASSPFLSGNSSSTLSFSSSLSSSSSSSSATLLPCRRRAILPLPRRCSSSFSVKSKIREIFMPALSSTMTEGKIVSWIKSEGDTLSKGDSVVVVESDKADMDVETFYDGILAAIVVPDGQAAPVGAPIAFLAESQEELAEAKAKAAKSQSNSASSSPSVASETSNPAPAMSQPLPPPPAVVSDEPRKAVATPQAKKLAKQHKVDIASVVGTGPFGRITPADVEAAAGIAPSKSNVATAAAPSPVTSAPPKAASGGGGGAVAPPPVPGSSVVPFTTMQSAVAKNMVESLSIPTFRVGYPVTTDALDALYERVKPKGVTMTAILAKAAAAALVQHPVVNASCKDGKNFAYNSNINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVDKARAKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVLADADGFFRVKNKMLVNVTADHRIIYGADLAAFLQTFSKIIENPETLTL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0196 489 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 82 111 IPR003016 -
Dod06g0196 489 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 4 OF PYRUVATE DEHYDROGENASE COMPLEX, CHLOROPLASTIC 13 489 - -
Dod06g0196 489 MobiDBLite consensus disorder prediction 142 196 - -
Dod06g0196 489 SUPERFAMILY CoA-dependent acyltransferases 269 488 - -
Dod06g0196 489 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 182 226 IPR036625 GO:0016746
Dod06g0196 489 CDD lipoyl_domain 59 129 - -
Dod06g0196 489 Pfam e3 binding domain 189 223 IPR004167 GO:0016746
Dod06g0196 489 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 269 488 IPR001078 GO:0016746
Dod06g0196 489 Coils Coil 131 151 - -
Dod06g0196 489 MobiDBLite consensus disorder prediction 239 260 - -
Dod06g0196 489 Gene3D - 52 157 - -
Dod06g0196 489 Pfam Biotin-requiring enzyme 59 129 IPR000089 -
Dod06g0196 489 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 189 226 IPR004167 GO:0016746
Dod06g0196 489 SUPERFAMILY Single hybrid motif 57 150 IPR011053 -
Dod06g0196 489 MobiDBLite consensus disorder prediction 145 168 - -
Dod06g0196 489 Gene3D - 182 227 IPR036625 GO:0016746
Dod06g0196 489 Gene3D - 265 488 IPR023213 -
Dod06g0196 489 ProSiteProfiles Biotinyl/lipoyl domain profile. 57 132 IPR000089 -
Dod06g0196 489 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 13 489 IPR045257 GO:0006086|GO:0045254
Dod06g0196 489 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0196 Dod-Chr6 2938291 2941755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0196 10 489 Acyl Lipid Metabolism Gene Families AT3G25860 71.429 0.0 635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0196 06 2938291 2941755 Dod06g0196 06 2938291 2941755 ECH