Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0185 ATGACTTCGGCTAAGAACGTGGCAAACGCTGTCGGTGGCAAAACTGCAAGAGCGTGCGATGGCTGCATAACGAAGCGTGCACGTTGGTACTGTGCTGCCGATGACGCTTTCCTCTGCCAAGCTTGTGACTCTTCCGTTCACTCTGCGAATCCACTGGCTCGTAGACACGAAAGAGTTCGGTTGAAAACGGCGTCGTTCAAGTCCTCCGATGCAGCAGCAGAACTCAGTAGCTGCAGTGCTCCGTCGTGGCACCATGGCTTCACAAAGAAAGCTCGAACACCAAGGCGCGGGAAGAACCATTCAACTACTTCAACACGCCAGACACCAAAGTCTTCGAGCAACGATGCCGCAGAGAGGAACAACCACCCTTTCCATCTGGTGCCAGAAGAAGGTTCCGATGAAGTGAATTCCCATGAAGAGAACGAGGAGCAGCTTCTTTATAGGGTTCCCATATTTGACCCTTTTGTAGCTGAGCTATGCAGCCCTCCTTCTTCTGTTACTTCAGCTGAAGAACAAGGAGCAGTAGCTGCTTCTGCTGATCAGGTTGAAAACAAGGGCAAAAAGGGGAACAATCATGGGGTTGAAACCTTGCATGGGTTTCCTCCGTCTGATATTGAACTTGCTCAGTTTGCTGCTGATGTTGAGAGCTTGTTGGGTAGGGGGCTGGAAACCGAGTGCATGGTGGGGATGGAAGAGCTTGGTCTGACTGATAACAAGGAGGAGGAGGAGTGCTGGGAGTGTTCTGTGCGTAGTGGGAAGAAGGTGAAGGTGGAACAACGTGATGATGATGAGAGGACGGAAGTTGCTGCAGCAGCCTGCAAGCTTGAGGCAGATCATCAGATGGAGATGGTGATAGGAAGAGAACCGTTCGAGTTGAGCTTTGATTATGACTCTCGTGAGACATGTGATGATGATGAGGTGAAGGAGAAGGTTATTGATTTGCATATGGCCAAAGATGTGGAGAAAGATGGAGAACTTGGAGTAAAAAATAATTATCTGGGTAAGAGAAGGAGGAAACTGTTGCAGCTAGATTATGAGGCAGTAATCAGTGCCTGGGCTAGTGACAAGTCTCCATGGACTTACGGTGACAAACCAAACATAGACCCCGATGAGTGCTGGCCTCACTGCATGGGAACTTGCGGGACGCATATTCGTCATCCTTATGGTGAAATGTTTGGATATGGATGTCATCCAGTAATGGGAGACGGAAGTAGAGAGGCAAGAGTGTCAAGGTACAGAGAGAAGCGTAGAACAAGGTTGTTCTCGAAGAAAATAAGGTACGAGGTTAGGAAATTGAATGCTGAGAAGAGGCCCAGAATGAAAGGGAGGTTTGTGAAGAGGGCTTCCTTTGCAGCACAGACATTTCCGTTGCTAAATAAATAA 1383 0.4873 MTSAKNVANAVGGKTARACDGCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTASFKSSDAAAELSSCSAPSWHHGFTKKARTPRRGKNHSTTSTRQTPKSSSNDAAERNNHPFHLVPEEGSDEVNSHEENEEQLLYRVPIFDPFVAELCSPPSSVTSAEEQGAVAASADQVENKGKKGNNHGVETLHGFPPSDIELAQFAADVESLLGRGLETECMVGMEELGLTDNKEEEECWECSVRSGKKVKVEQRDDDERTEVAAAACKLEADHQMEMVIGREPFELSFDYDSRETCDDDEVKEKVIDLHMAKDVEKDGELGVKNNYLGKRRRKLLQLDYEAVISAWASDKSPWTYGDKPNIDPDECWPHCMGTCGTHIRHPYGEMFGYGCHPVMGDGSREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAAQTFPLLNK* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0185 460 CDD Bbox1_BBX-like 18 61 - -
Dod06g0185 460 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Dod06g0185 460 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 6 1 453 - -
Dod06g0185 460 Pfam CCT motif 405 447 IPR010402 GO:0005515
Dod06g0185 460 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 453 - -
Dod06g0185 460 SMART bboxneu5 14 61 IPR000315 GO:0008270
Dod06g0185 460 MobiDBLite consensus disorder prediction 100 119 - -
Dod06g0185 460 Pfam B-box zinc finger 17 59 IPR000315 GO:0008270
Dod06g0185 460 MobiDBLite consensus disorder prediction 122 141 - -
Dod06g0185 460 ProSiteProfiles CCT domain profile. 405 447 IPR010402 GO:0005515
Dod06g0185 460 MobiDBLite consensus disorder prediction 84 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0185 Dod-Chr6 2750929 2753195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0185 5 447 C2C2-CO-like Transcription Factor Family AT1G25440 45.175 2.15e-107 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Dod06g0185 zf-B_box 3.7e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0185 06 2750929 2753195 Dod06g0185 06 2750929 2753195 ECH