Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0176 ATGCCCCCCCTCATTAAGCACAATAACCACGCAAATTGTCTACGTACCCTATGCCTTGTCTTGGTTTCTTTCTGGAGACCAGAAGGAAACCCCTTAGACCTTAACAATTTGCCTGATGAGTACTCTCGAGATAATGGTAAACAAATCCTCGAAGACAGCTCCTCACCCGGTTGCAGGAAAAAGAAAAGCGGCGGTAAGGATGGAAAAGACGAGTGTGGGAAGGTCTACGAGTGTAGATTTTGTTCCCTTAAGTTCTGCAAGTCTCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGGCTAG 306 0.4837 MPPLIKHNNHANCLRTLCLVLVSFWRPEGNPLDLNNLPDEYSRDNGKQILEDSSSPGCRKKKSGGKDGKDECGKVYECRFCSLKFCKSQALGGHMNRHRQG* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0176 101 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 101 IPR013087 -
Dod06g0176 101 Gene3D Classic Zinc Finger 52 101 - -
Dod06g0176 101 MobiDBLite consensus disorder prediction 54 71 - -
Dod06g0176 101 MobiDBLite consensus disorder prediction 35 71 - -
Dod06g0176 101 PANTHER ZINC FINGER PROTEIN JAGGED 26 100 IPR045320 GO:0003700
Dod06g0176 101 PANTHER ZINC FINGER PROTEIN JAGGED 26 100 IPR031113 GO:0007275
Dod06g0176 101 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0176 28 100 C2H2 Transcription Factor Family AT1G13400 61.039 3.52e-17 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod06g0176 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0176 06 2645337 2647119 Dod06g0176 06 2645337 2647119 ECH