Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0172 ATGAGACTCTCCCTCTTCTACCTCACACCCCAACACCATTGCCACACCGCCATCAACCTCTTCACTACTCCCTCTTCCTCCACCAGGCCCCGCATGGTCCCCGCCGCCACCGCCTTCCACCGCCGCAAAGACAAGGTGGTGGTCATAATGGGCGCCACCGGCTCCGGAAAATCCCGCCTCTCCGTCGACCTCGCCACCCTCTTCTTCTCCTTCTCAGAGATCATCAACTCCGACAAAATGCAAGTCTACAACGGCCTCGAAACCACCACCAACAAGATCCCTCCCAACGAGCGCAACGGCGTCCCCCACCACCTCCTCGGCGACGTCCCACCCGCCGCCGGCGAGTTCTTCCCCTCCGACTTCCGCCTCCGCGCCGGCGGAATCATCTCCAACATCATCTCCCGCAGCAAGCTCCCCATCGTAGTCGGCGGCTCCAACTCCTTCATCCACGCACTCCTGGTAGAACGATTCCACCCCGAGTTGAACGTGTTCAATGGTGATGACTCAGTTAAGATATCTTCCCAGTTGAGATACGATTGCTGCTTTCTGTGGGTGGACATATCGTTCGCTGTGTTATCGGAATACCTGCTGAAGCGAGTCGACGACATGGTTGACGCAGGTATGGTGGACGAGTTGGCCGAGTTCTTCGACCCTGACTCGCCCGATTTGGAACTTGACTCGGAAAAACGAAGCGGGTTGAGGAAGGCCATAGGGGTGCCAGAGTTTGACCGTTTTTTCAAGGAGTACCCACCCGGGAGGAGCCACAGTGAGGAGAATGATCCCCTGCGGAAGGCTGCATACGATAAAGCGGTGAGGGCCATTAAGGATAACACGTGTCAGCTTGCCAAGAGGCAGATAGGAAAGATCATGCGGTTAAAAGCGGCCGGCTGGGACCTACGGAGGATAGACGCCACGGAGGCGTTTAGGGCGCTGATGACGTCAGGGCGTACCGGCGGCGCCGCTGCCGGAGAGAGGTGGTCGGATTTGTGGCAGAGAGATGTGTTGCAACCAAGCGTGAACATTGTGGGGCGGTTCTTGATGGAGTAG 1047 0.5788 MRLSLFYLTPQHHCHTAINLFTTPSSSTRPRMVPAATAFHRRKDKVVVIMGATGSGKSRLSVDLATLFFSFSEIINSDKMQVYNGLETTTNKIPPNERNGVPHHLLGDVPPAAGEFFPSDFRLRAGGIISNIISRSKLPIVVGGSNSFIHALLVERFHPELNVFNGDDSVKISSQLRYDCCFLWVDISFAVLSEYLLKRVDDMVDAGMVDELAEFFDPDSPDLELDSEKRSGLRKAIGVPEFDRFFKEYPPGRSHSEENDPLRKAAYDKAVRAIKDNTCQLAKRQIGKIMRLKAAGWDLRRIDATEAFRALMTSGRTGGAAAGERWSDLWQRDVLQPSVNIVGRFLME* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0172 348 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 34 347 IPR039657 -
Dod06g0172 348 Gene3D - 43 346 IPR027417 -
Dod06g0172 348 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 189 299 - -
Dod06g0172 348 Pfam IPP transferase 81 157 - -
Dod06g0172 348 Pfam IPP transferase 175 286 - -
Dod06g0172 348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 221 IPR027417 -
Dod06g0172 348 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 34 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0172 Dod-Chr6 2561513 2562631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0172 177 346 C2H2 Transcription Factor Family AT2G27760 30.729 4.50e-14 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0172 06 2561513 2562631 Dod06g0172 06 2561513 2562631 ECH