Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0166 ATGCCGACGAAGGAGGACAGCTCGGAGAAGGAGAAGTGCCTTGAGCTCTTTCTGAAGCTCGGCCTTGGACGAGCGCACCGCCCGCAACACCGTCGCCAACAACAAAGTCACCACCAACCTCACTTCCGTCATCAACGAGTTCTCCATTTTCCGTTATTCATTATGTTAATTGCTGGTGTTACCGATGGATGCAGCAGAACTGTTGGAAATCTTCTTTACACGGTTGCAACCAAGTACCCTGGAAACGCCTTGCCCCATCGTCCAACATTGCTGCAATACATTGTTTCCTCAAAGGTGAAAACACCGGCGCAGTTAGATGCAGCGCTAGCTTTTTTTGCTGCCCTGGGTCATGAGAATCTTGATTTGAACAAATTTGAAGAAGCTTGTGGCGTTGGTGTTGAGGTTTCTACAGAAGATATCAAACATGCTGTTAATGAAGTTTTTGAAGAGAATAAGGCTTCAATTTTGGAGCTACGCTACCGAACAAATGTGGGTGAGTTACTTGGGCATGTGCGCAAGAGGCTCCCATGGGCTGATGCAAAAGTTGTCAAGCAAGTCGTTGATGCAAAACTATATGAGCTACTAGGAGATAGGACAGCAGCAGATGATGAAAAGCCTTCTAGAAAGAAGAAAGAGAAACCTGCTAAAGTTGAGGATAAGGAAGCACCTACTGCTGTGCCAGAAAAACTGCTTGAAGAAGATCTGAATCCATACTCGATATTCCCTAATCCAGAGGAAAACTTCAAGGTATTTAATTCCCTTATTTTGATTATTGGTTGTATTCTGAGATGTTGCAATACGAAGGAACTTCTTGACAAACACTTGAAAGCAACAGGTGGGAAAGTTTTGACCCGCTTTCCACCTGAACCAAATGGATATTTGCATATTGGTCACGCCAAGGCAATGTTTATTGATTTTGGGCTGGCAAAAGATAGAGATGGAGGTTGCTATTTGAGGTATGATGATACAAATCCTGAAGCAGAAAAGCAAGAATATATTGATCACATTCAGGAAATTGTCCGGTGGATGGGTTGGGAACCATTCAAGATTACTTACACAAGTGATTACTTCCAAGAATTATATGATTTAGCTGTGGAGCTCATAAGGAGGGGTCATGCTTATGTTGATCACCAGACACCTGATGAGATAAAGGAGTATAGGGAGAAGAAATTAAACAGTCCCTGGAGGGATAGGCCAATTTCAGAATCATTGAAACTCTTTGAGGATATGAGGCGTGGACTGATAGAGGAAGGCAAAGCAACTCTTAGGATGAAGCAAGACATGCAGAGTGATAATTATAATATGTATGACCTTATTGCATACCGCATTAAGTTTACTCCACACCCTCATGCTGGAGATAAATGGTGTATTTATCCAAGCTATGATTATTCTCACTGCATTGTGGATTCTCTTCAGAATATCACACATTCACTATGTACCCTTGAATTTGAGACGCGTCGTGCATCATACTATTGGTTGTTACATGCATTAGGCATTTACCAACCTTATGTATGGGAATATTCAAGGTTGAATGTCTCAAACACAGTAATGTCAAAGCGTAAGCTAAATCGTCTAGTGACAGACAAATGGATTGATGGGTGGGATGATCCTCGCCTAATGACACTAGCTGGTTTGCGGCGTAGAGGCATGACTCCTACTGCAATCAATGCTTTTGTCCGAGGAATTGGAATCACTAGAAGTGACGGCACTTTGATATCTGTGGAACGCCTTGAATATCATGTCAGGGAAGAATTGAACAGAACAGCTCCTCGAGCAATGGTTGTCCTGAATCCACTCAAGGTTGTTATAACTAATCTTGAAGCCAACTCAGCAGTAGAGGTTGATGCAAAGAAATGGCCTGATGCTCAAGCTGATGATGCATCCGCTTTGTACAAGATTCCATTTTCCAATGTTGTATACATTGAGCGTACAGATTTCCGGATGCAAGATTCAAAAGATTATTATGGCCTTGCCCCTGGTAAATCTGTGATACTCAGGTACGCATTTCCTATAAAGTGCACTGAAGTTGTTCTAGCTGATGACAATGAGACTATTCTTGAAATTCGGGCTGAGTATGATCCTTCAAAGAAGACAAAGCCTAAGGGCGTTCTCCATTGGGTTGCTCAACCTTCTCCTGGTGTTGATCCATTGAAGGTGGAAAGTCAGAATCCTGCTGAACTCGACAATTGGCTTGGTGATCTAAACCCTAATTCCAAAGTGGTGATTCCCAATGCATATGGTGTGTCCTTACTTCAGGATGCAAAACTGGGGGACAAGTTCCAATTCGAACGATTAGGGTATTTTGTGGTCGACAAGGACTCCACCGCAGAAAAACTTGTGTTCAATCGGACTGTGACCTTAAAAGACAGCTATAGCAAGGGTGGAAAGTAG 2391 0.4279 MPTKEDSSEKEKCLELFLKLGLGRAHRPQHRRQQQSHHQPHFRHQRVLHFPLFIMLIAGVTDGCSRTVGNLLYTVATKYPGNALPHRPTLLQYIVSSKVKTPAQLDAALAFFAALGHENLDLNKFEEACGVGVEVSTEDIKHAVNEVFEENKASILELRYRTNVGELLGHVRKRLPWADAKVVKQVVDAKLYELLGDRTAADDEKPSRKKKEKPAKVEDKEAPTAVPEKLLEEDLNPYSIFPNPEENFKVFNSLILIIGCILRCCNTKELLDKHLKATGGKVLTRFPPEPNGYLHIGHAKAMFIDFGLAKDRDGGCYLRYDDTNPEAEKQEYIDHIQEIVRWMGWEPFKITYTSDYFQELYDLAVELIRRGHAYVDHQTPDEIKEYREKKLNSPWRDRPISESLKLFEDMRRGLIEEGKATLRMKQDMQSDNYNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYSHCIVDSLQNITHSLCTLEFETRRASYYWLLHALGIYQPYVWEYSRLNVSNTVMSKRKLNRLVTDKWIDGWDDPRLMTLAGLRRRGMTPTAINAFVRGIGITRSDGTLISVERLEYHVREELNRTAPRAMVVLNPLKVVITNLEANSAVEVDAKKWPDAQADDASALYKIPFSNVVYIERTDFRMQDSKDYYGLAPGKSVILRYAFPIKCTEVVLADDNETILEIRAEYDPSKKTKPKGVLHWVAQPSPGVDPLKVESQNPAELDNWLGDLNPNSKVVIPNAYGVSLLQDAKLGDKFQFERLGYFVVDKDSTAEKLVFNRTVTLKDSYSKGGK* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0166 796 PANTHER OS05G0182800 PROTEIN 57 795 - -
Dod06g0166 796 Gene3D HUPs 260 592 IPR014729 -
Dod06g0166 796 Pfam tRNA synthetases class I (E and Q), catalytic domain 281 586 IPR020058 GO:0004812|GO:0005524|GO:0043039
Dod06g0166 796 TIGRFAM glnS: glutamine--tRNA ligase 282 793 IPR004514 GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425
Dod06g0166 796 MobiDBLite consensus disorder prediction 202 228 - -
Dod06g0166 796 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 58 180 IPR007639 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
Dod06g0166 796 CDD GlnRS_core 281 591 - -
Dod06g0166 796 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 183 250 IPR007638 GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425
Dod06g0166 796 PRINTS Glutamyl-tRNA synthetase signature 459 469 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Dod06g0166 796 PRINTS Glutamyl-tRNA synthetase signature 285 297 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Dod06g0166 796 PRINTS Glutamyl-tRNA synthetase signature 314 327 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Dod06g0166 796 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 288 299 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Dod06g0166 796 Gene3D - 7 133 IPR042558 -
Dod06g0166 796 Gene3D - 134 203 IPR042559 -
Dod06g0166 796 Pfam tRNA synthetases class I (E and Q), anti-codon binding domain 589 771 IPR020059 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
Dod06g0166 796 SUPERFAMILY Nucleotidylyl transferase 281 595 - -
Dod06g0166 796 Gene3D Ribosomal Protein L25; Chain P 593 712 IPR020056 -
Dod06g0166 796 PANTHER GLUTAMINE-TRNA LIGASE 57 795 - -
Dod06g0166 796 SUPERFAMILY Ribosomal protein L25-like 589 790 IPR011035 GO:0006412
Dod06g0166 796 Gene3D Ribosomal Protein L25; Chain P 715 789 IPR020056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0166 Dod-Chr6 2493937 2501919 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0166 06 2493937 2501919 Dod06g0166 06 2493937 2501919 ECH