Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0160 ATGGACAACCAACTTGAACCACAAGCACAGCCCAAAAGAACAAACCCCACTTCCCCAACGCGCTTAAAGCTCTTCGGCTTCAGCGTCCATGAAGACTACTCCACCATGGAAGACGAGGAAGTGCTGCATGAAGACTCAGCACCAGACTCCAACGCCAAGCCCGCTTCTTCCAGTTCCCCCTCCAAGTCTCCGGACTCCGGAGGTGGCGGTGGCGGCGGTTTTTCTTCTTCCTCCGGCGACCGGAAATACGAGTGTCAATACTGCTGCAGAGAGTTCGCAAATTCACAAGCACTTGGTGGGCACCAGAACGCGCACAAGAAAGAGCGTCAACAGCTGAAGCGCGCACAGTTACAGGCCACAAGAAACGCCGCCGTTTCGTTCGTCCGGAACCCCATCATCTCCGCCTTCGCCCCTCCGCCGCACCTCCTGGCGCCGGGCTCCGTGGTGGTTCCGGCACCGCCCCCCTCCTGGGTCTACGTTCCGCCACGTGCCGCTCCTCCTCCGTTCCACGTGTCAGTATCACACGGTTGTGTCTTCCCCTCCTCGAACAGCACCAGCATCGGTAACAATATTAACTCCGGTAATTATAGCGCCAGTAACGGCAACGGTAACGGTAATTTTAATGTTAAATCGGCGGGTGCAGCGATGTTTCCCTATGGTGGGGGTGTAGGGGATTCGTCAACGATGGTGGGGTCGCAGGTGCAGGCCCGGGCCCACCACGGTAGGATTGATGGGCCCTCTTTGAGTAGGTTTTCCAAAGGGGATGGTGGGCCCAGTTTCGATGATGCATTGGGCTTGGACTTGCACCTTAGCCTTGCCCCTGCTGCGCCCTGA 834 0.5779 MDNQLEPQAQPKRTNPTSPTRLKLFGFSVHEDYSTMEDEEVLHEDSAPDSNAKPASSSSPSKSPDSGGGGGGGFSSSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFAPPPHLLAPGSVVVPAPPPSWVYVPPRAAPPPFHVSVSHGCVFPSSNSTSIGNNINSGNYSASNGNGNGNFNVKSAGAAMFPYGGGVGDSSTMVGSQVQARAHHGRIDGPSLSRFSKGDGGPSFDDALGLDLHLSLAPAAP* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0160 277 MobiDBLite consensus disorder prediction 32 47 - -
Dod06g0160 277 MobiDBLite consensus disorder prediction 232 256 - -
Dod06g0160 277 SUPERFAMILY beta-beta-alpha zinc fingers 79 110 IPR036236 -
Dod06g0160 277 PANTHER ZINC FINGER PROTEIN GIS3 12 277 - -
Dod06g0160 277 PANTHER ZINC FINGER PROTEIN 5 12 277 IPR044299 GO:0010090
Dod06g0160 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Dod06g0160 277 Gene3D Classic Zinc Finger 73 130 - -
Dod06g0160 277 MobiDBLite consensus disorder prediction 50 73 - -
Dod06g0160 277 MobiDBLite consensus disorder prediction 1 22 - -
Dod06g0160 277 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
Dod06g0160 277 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0160 Dod-Chr6 2412779 2414198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0160 14 275 C2H2 Transcription Factor Family AT1G68360 47.445 2.06e-55 177
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0160 06 2412779 2414198 Dod06g0160 06 2412779 2414198 ECH