Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0141 ATGTTCCCTTCTGTTCTGCTGCTGTTTATCCTTCTTTGCTGCAACTCTCTTGCACCTCTTGTGAATTCTCTCAATGCTGAAGGCTCTGTGCTTTTGACGCTCAAGCAGTCCCTCACTGACCCTCAAGGGTCTCTCAGTAACTGGAATTCTTCTGATGCCAACCCCTGTTCATGGAATGGGGTCACTTGCAAGGACCAAAGTGTTGTCTCCATTAGCATCCCAAAGAGGAAACTTTATGGCTCTCTTCCTTCAACTCTTGGATCTCTCTCCCAGCTTCGGCATGTCAACTTCAGGAACAATAGGCTCTTTGGTAGCTTGCCTGCTGATCTCTTTCAAGCTCAGGGACTGCAAAGCTTGGTGCTTTATGGCAATTCCTTTTCTGGGTCTGTTCCCAAGGAGATTCAGAATCTCAGGTACCTTCAAACTCTTGACTTGTCTCAGAATTTCTTTAATGGGTCATTGCCTGCTACAATTGTTCATTGCAAGAGGCTCAAAACCCTTGTTCTCAGTAGAAACAATTTCACTGGCCCTTTGCCTGATGGGTTTGGTGCTGGTTTGTCTTCCCTTGAAAAACTTGACCTTTCTTTCAATCAAATCAATGGTTCAATTCCTAGTGACATGGGAAATCTAACTAGCTTGCAAGGAACTGTTGATTTGTCTCATAATAATTTTAGTGGTTTAATACCGGCTATCCTTGGTAATTTGCCTGAGAAGGTTTACATTGATCTTACTTACAACAATTTGAATGGCCCAATACCCCAGAATGGTGCTCTAATGAATAGAGGACCAACTGCTTTTATTGGCAATCCTGGTCTATGTGGCCCTCCTTTGAAGAATCCATGTGGCCCTGGTACTCCAGGTGCTAGTTCACCTTCTTCACTTCCATTCCTGCCGGATAACTACCCTCCTCAGGGCTCTGGTAATGGTTCTGGGAGAAGTGAGAAAAGCAAAGGGCTAAGTAAGGGTGCTGTGGTTGGCATTGTTGTGGGTGACATAATTGGAATTTGCCTTTTGGGTTTGCTGTTCTCTTTTTGCTACTCAAGGGTTTGTGGTCTTAGTCAGGATCAGGATGACAGCGGTGTTATTAAGGGGAGGAAAGGAGCTAAAGAGTGCTTCTGCTTCAGAAAGGATGAATCAGAGGCCCTATCTGATAATGTTGAGCAATATGATCTTGTCCCATTAGATAACCAAGTGGCCTTTGATTTGGATGAGCTTCTTAAGGCTTCAGCTTTTGTTCTTGGTAAGAGTGGAATAGGAATTATGTATAAAGTGGTGCTTGAAGATGGGCTTGCCTTGGCTGTGAGAAGATTGGGGGAGGGAGGTTCTCAAAGGTTTAAAGAGTTCCAAACTGAAGTAGAGGCAATAGGAAAGTTAAGACATCCAAACATTGTGACTCTGAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGATTATATACCCAATGGAAGCCTTGCAACAGCAATTCATGGGAAGGCAGGACTCCTCACATTTAGACCGCTATCTTGGTCCTATCGATTGAAGATCATGAAAGGAACTGCAAAAGGATTGGTCTACCTGCATGAGTTTAGCCCCAAAAAATATGTCCATGGAGACCTGAAGCCAAGTAACATACTGCTTGGACATAACATGGAACCCCACATTTCTGATTTTGGACTCGGCCGGCTCGCAAATATTGCTGGAGGGTCCCCAACTTTGCAATCCACCCGTGTGGCTGCAGAGAAACCACACGAGAGACAAAAGAGCTTGTCAACAGAAGTTGCAACTAATGTTATAGGAAACGGTTATCAGGCTCCAGAAGCACTGAAAGTTGTGAAGCCATCACAGAAGTGGGATGTTTATTCTTATGGCGTGATTTTGTTAGAGATGATCACAGGAAGGTTACCAATTATCCAAGTGGGTAACTCAGAGATGGACCTTGTTCAATGGATTCAGTTCTGCATTGAGGAGAAGAAGCCACTCTCAGATGTATTAGACCCGTATTTAGCTGAAGATGCAGATAAGGAAGAGGAGATCATTGCAGTTTTGAAGATTGCAATCGCCTGTGTCCATAGCAGTCCTGAAAAGAGACCTACAATGAGGCACGTGCTTGATGCTTTGGAGAGATTGTCTGTATCCTCTGATTGA 2136 0.4405 MFPSVLLLFILLCCNSLAPLVNSLNAEGSVLLTLKQSLTDPQGSLSNWNSSDANPCSWNGVTCKDQSVVSISIPKRKLYGSLPSTLGSLSQLRHVNFRNNRLFGSLPADLFQAQGLQSLVLYGNSFSGSVPKEIQNLRYLQTLDLSQNFFNGSLPATIVHCKRLKTLVLSRNNFTGPLPDGFGAGLSSLEKLDLSFNQINGSIPSDMGNLTSLQGTVDLSHNNFSGLIPAILGNLPEKVYIDLTYNNLNGPIPQNGALMNRGPTAFIGNPGLCGPPLKNPCGPGTPGASSPSSLPFLPDNYPPQGSGNGSGRSEKSKGLSKGAVVGIVVGDIIGICLLGLLFSFCYSRVCGLSQDQDDSGVIKGRKGAKECFCFRKDESEALSDNVEQYDLVPLDNQVAFDLDELLKASAFVLGKSGIGIMYKVVLEDGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIVTLRAYYWSVDEKLLIYDYIPNGSLATAIHGKAGLLTFRPLSWSYRLKIMKGTAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHISDFGLGRLANIAGGSPTLQSTRVAAEKPHERQKSLSTEVATNVIGNGYQAPEALKVVKPSQKWDVYSYGVILLEMITGRLPIIQVGNSEMDLVQWIQFCIEEKKPLSDVLDPYLAEDADKEEEIIAVLKIAIACVHSSPEKRPTMRHVLDALERLSVSSD* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0141 711 SUPERFAMILY Protein kinase-like (PK-like) 412 704 IPR011009 -
Dod06g0141 711 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 6 710 - -
Dod06g0141 711 Pfam Protein kinase domain 413 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0141 711 ProSiteProfiles Protein kinase domain profile. 407 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0141 711 SMART serkin_6 412 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0141 711 MobiDBLite consensus disorder prediction 278 315 - -
Dod06g0141 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Dod06g0141 711 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Dod06g0141 711 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 710 - -
Dod06g0141 711 Gene3D Ribonuclease Inhibitor 76 284 IPR032675 -
Dod06g0141 711 Gene3D Ribonuclease Inhibitor 18 75 IPR032675 -
Dod06g0141 711 Gene3D Transferase(Phosphotransferase) domain 1 483 711 - -
Dod06g0141 711 Gene3D Phosphorylase Kinase; domain 1 376 482 - -
Dod06g0141 711 CDD STKc_IRAK 413 706 - -
Dod06g0141 711 SUPERFAMILY L domain-like 26 278 - -
Dod06g0141 711 Pfam Leucine rich repeat 163 214 IPR001611 GO:0005515
Dod06g0141 711 Pfam Leucine rich repeat 91 148 IPR001611 GO:0005515
Dod06g0141 711 SMART LRR_typ_2 186 209 IPR003591 -
Dod06g0141 711 SMART LRR_typ_2 137 161 IPR003591 -
Dod06g0141 711 SMART LRR_typ_2 89 113 IPR003591 -
Dod06g0141 711 SMART LRR_typ_2 210 234 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0141 Dod-Chr6 1970295 1973053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0141 6 711 Receptor kinase-like Gene Family AT2G01210 68.296 0.0 987
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod06g0141 Pkinase 8.2e-34 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0141 06 1970295 1973053 Dod06g0141 06 1970295 1973053 ECH