Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0138 ATGGAGACGCAACCGCCAACGCCGCCACCAACAGCACCGCCGCTATCCTCGGTGGCTCCGCCGCCTCAACCACAACAACCACCGCCGATACCGCCGGCTCACCTCAGCTACCCTGACTCAGTGGACTCATCACCGCGGTCCCGCACAACGGACACGTGGGACGAGCCGTTCCCGCCGGCGTCATCGAAGCTCCGGCTGATGTGCAGCTACGGTGGCCACATCGTGCCACGGCCACACGACAAGTCCCTCTGCTACGTCGGCGGAGACACGCGCATCGTGGTTGTTGAACGCGCCACCTCACTCGCGGACCTCTCCACGCGCCTCTCGAAAACGTTCCTTAACGGAAGACCGTTCAGCCTCAAGTACCAGCTCCCGAACGAGGACCTCGATTCGTTAATCTCAGTTACCACCGACGAGGACCTCGACAACATGATCGACGAGTATGACCGAACCAACAACAACCCTTCGATTAAACCCTCACGAATCAGGCTCTTCCTTTTCCCGACGAAGCCCGATTCGGTACAGAGTATTCCCCCGATTCTAGAAAGTTCCGCCAAGTCTGAGGATTGGTTCCTCAACGCGTTAAACGGCGCGGGATTGCTTGATAGGGGCTTTTCTGAGTCTGCTTCCGTGAATTGTCTTTTGGGACTCGACGACGACGTCGTTTCGGCGGGCAATGTTGAGCACGGGTCGAGGGACCCTGTTGAGGGTTCTTCTTCTCAGCCTGGATCTTTCGGGAATGGGAAGAATTTGAAGCAGGAGGTTCATTCGGTCCCCGATTCGCCGATGCTGGAGACTACTTCGTCGTTTGGGTCCACTTCTTCGTCGCCGTCGCTGGCGAATTTGCCGCCGATTAGGCTTCATGTGGAGGATGGTGGTGGTAGTGGGGGTGGGGTTAGGGTGCAGGATCAGAAGGTGTTGGGGATTGAGGAGCAGTTTGCGCAGATGGGTGTGGGTGTGGGTGTGGGTGTTGGTGTTGGTGGTGGGCAGAAGCAGGATGAGGGCGGTTTTGTGATGATTTCTTCTCCACCGCCTCCGCCGGTACCGGTGACACTTTCTGGAGCGGCGGTGGGCATGCCGGTGAGCGCACCGGTGGTGGGTGGGGAGTACCAGAACAGGGTTTTCTCCGATGATGAGAGATCGGATCATGGGGTCCCCGTGGGTTACAGAAAACCACCGACACCTCAGCCGCAGCAGCAGCCGCCACCACCGCAGTCACAGCCTCAGAATCAGAATCAGAATTATCAGAATCAAACACAACCACAGCCTCCTCAGGTGTTGCAGCCTCAATTTCAACCCAAGTCAACTGGCGTCGTTGATTTGCCTTCCCCAGATTCAGTTTCAAGTGACAGTAGTCTTTCGAATGCAATGTCCCGTCCAAAGCCTTTAATCTATCAAGAACAGGTTCAGATTCAATCTGGGACGACAAGGGTTCCTAGTAACCCAGTTGATCCAAAACTCAATGTATCTGATCCGCATGGTCGGATCCAGATGCAGCAACATGTACAGGACCCAGGATATTTGTTGCAACAGCAATTCGAGCAGCAGCACCATCAGCACCATCAGCAGCATCAGCAACATCAGCAGCATCAGCAGCAGCAGCATCAGCAGCAGCAGCAGCATCAGCAGCAGCAGCAGCAGCAACATCAGCAGCATCAGCAGCAGCAGCAACATCAGCAGCCTCAACAGCAGCAGCAGTTTATGCACGGCACACACTTCATTCACCATGCCCCTCCTGGGGCTGTGCCAATTTCTGCATACTATCCTGTATATCCTTCCCAGCAACAGCCTCATCACCAGGTTTACTATGTGCCTGCCAGACAGCCCCAAGCTTACAACTTACCTGTGCAGCAGCCTAACATAGGTGAATCTGCCGCAACCATCTCTTCTAGCCGGCCCCAGAATCCACCGAATCCTGCTGCATTGGTTCAGCCTTCTGCAGCTTACAACCCCATGAGAAACGCTCCCCTTCCTAAAACTGAAATGACAGCGGCTGCATACAGAGCTGCAACTGCAGGCACCCCTCAATTGGTTCAAGTTCCTGCTAGTCAGCATCAGCAACAGTATGTTGCATACTCCCAGATTCACCACCCTTCTCAGTCCATTGCTCCAACTTCTGCTGCTCCAGCTAATTATGCTTATGATTATGCGGATCCTGCGCATGCTCAGATATACTACTCTCAACCTCTGGCACCGTCGATGCCTTCTCAGTACCAGACCATGACAGGTGCTGGCGTAATGATGCCAGATGTTTCTGGTCAGCATCCTTCTGACAGCATGAAGCAGCAGATAAGAACTTCTCAACCATTATAA 2313 0.5452 METQPPTPPPTAPPLSSVAPPPQPQQPPPIPPAHLSYPDSVDSSPRSRTTDTWDEPFPPASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVERATSLADLSTRLSKTFLNGRPFSLKYQLPNEDLDSLISVTTDEDLDNMIDEYDRTNNNPSIKPSRIRLFLFPTKPDSVQSIPPILESSAKSEDWFLNALNGAGLLDRGFSESASVNCLLGLDDDVVSAGNVEHGSRDPVEGSSSQPGSFGNGKNLKQEVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRLHVEDGGGSGGGVRVQDQKVLGIEEQFAQMGVGVGVGVGVGGGQKQDEGGFVMISSPPPPPVPVTLSGAAVGMPVSAPVVGGEYQNRVFSDDERSDHGVPVGYRKPPTPQPQQQPPPPQSQPQNQNQNYQNQTQPQPPQVLQPQFQPKSTGVVDLPSPDSVSSDSSLSNAMSRPKPLIYQEQVQIQSGTTRVPSNPVDPKLNVSDPHGRIQMQQHVQDPGYLLQQQFEQQHHQHHQQHQQHQQHQQQQHQQQQQHQQQQQQQHQQHQQQQQHQQPQQQQQFMHGTHFIHHAPPGAVPISAYYPVYPSQQQPHHQVYYVPARQPQAYNLPVQQPNIGESAATISSSRPQNPPNPAALVQPSAAYNPMRNAPLPKTEMTAAAYRAATAGTPQLVQVPASQHQQQYVAYSQIHHPSQSIAPTSAAPANYAYDYADPAHAQIYYSQPLAPSMPSQYQTMTGAGVMMPDVSGQHPSDSMKQQIRTSQPL* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0138 770 CDD PB1_UP2 67 167 - -
Dod06g0138 770 SUPERFAMILY CAD & PB1 domains 79 177 - -
Dod06g0138 770 MobiDBLite consensus disorder prediction 526 567 - -
Dod06g0138 770 MobiDBLite consensus disorder prediction 409 460 - -
Dod06g0138 770 MobiDBLite consensus disorder prediction 390 408 - -
Dod06g0138 770 MobiDBLite consensus disorder prediction 755 770 - -
Dod06g0138 770 MobiDBLite consensus disorder prediction 260 281 - -
Dod06g0138 770 Gene3D - 83 167 - -
Dod06g0138 770 ProSiteProfiles PB1 domain profile. 63 169 IPR000270 GO:0005515
Dod06g0138 770 PANTHER EXPRESSED PROTEIN 522 761 - -
Dod06g0138 770 MobiDBLite consensus disorder prediction 1 35 - -
Dod06g0138 770 MobiDBLite consensus disorder prediction 40 56 - -
Dod06g0138 770 MobiDBLite consensus disorder prediction 472 492 - -
Dod06g0138 770 MobiDBLite consensus disorder prediction 233 251 - -
Dod06g0138 770 PANTHER OS05G0427100 PROTEIN-RELATED 522 761 - -
Dod06g0138 770 MobiDBLite consensus disorder prediction 225 287 - -
Dod06g0138 770 Pfam PB1 domain 79 168 IPR000270 GO:0005515
Dod06g0138 770 MobiDBLite consensus disorder prediction 376 460 - -
Dod06g0138 770 PANTHER EXPRESSED PROTEIN 25 566 - -
Dod06g0138 770 Coils Coil 527 555 - -
Dod06g0138 770 MobiDBLite consensus disorder prediction 1 58 - -
Dod06g0138 770 SMART PB1_new 78 169 IPR000270 GO:0005515
Dod06g0138 770 MobiDBLite consensus disorder prediction 746 770 - -
Dod06g0138 770 MobiDBLite consensus disorder prediction 513 567 - -
Dod06g0138 770 PANTHER OS05G0427100 PROTEIN-RELATED 25 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0138 Dod-Chr6 1930087 1932740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0138 60 243 MAP Kinase Kinase Kinase AT1G79570 34.783 3.73e-25 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0138 06 1930087 1932740 Dod06g0138 06 1930087 1932740 ECH
Dod06g0138 06 1930087 1932740 Dod02g3687 02 75513447 75516190 ECH