Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0131 ATGGAGAAAGTTTGTGAGTTCTGCACAGATTTGAGGCCACTTGTTTATTGTAAGGCTGATGCAGCATATCTGTGCCTACCCTGTGATGCAAAGGTCCATTTAGCGAATGCATTGTCTGGCCGGCACCTCCGGACCCTTGTGTGTAACTCGTGTAGATACCATCTTGCTTATGTACAGTGTTTGGACCACAAAATATTAATCTGTCATGACTGTGATCAAAAGCTGCACAACATGTCTTTAACACATCATAAACGAGCTATCAGAAGTTTCATGGGTAGCCCGTCTGCCAAAGACTATGCAACACTATGGGGTTTTGGATTGAATGAGATAGAAAATTGTGCCAGTCAGGATCTATTTGCATCTATTTCATGTGTTTCTGCAGATTCAAATGTGGTACAAGTCTCTGGACAGCCTGGTAAGGTATCTGAGGCCAAACTTCATGGGGGATCGATCAGCCAACAAGGTCAGATACTGTACAGTGATCAAGAGCGGCAAACTATTCTGAAACAGATTATTGATTTAAAACGGCTTCAGCTAAATGAGGAAAGTGATCAATCTATGGAGATAAAGGAGCTACAAGAAACAGGCTTATCTTCTTCAGCATATCATACTATTAGGAAACTGGATGAAAAATCCAATCAGCAAGAACAAAATTCCCAGGTTCATGCTACTAATATTGCGGAAAAGGACAGTCCCACGGTGAAGCTGAATCCTGAAAGTTTGTCGTCTACGTTTTCTCAGCTTGATAATTTATCGTCTTCAATTGTAGACCTTCCCTTGCATGGAGAGTTGTTCTGGACATGCAAAAGTCCGCTTCGAAGTAATCAGTTGTGGTCCCAAAACATTCAAGACCTTGGGATATGCGAAGAACTTGTTTGTCGAGATGATTTTAACATACCTGATGTTGACTTAACATTCCAAAACTTTGAGGAAATATTTGGAGGAGATCAAGATCCAGTTAGAGTAATGCTTGCTGATAAGGATGCCTCCTGCTCTTCTTTAGAGAAGGATATGTCTGTTGATAAGTCAGATATTGACAATCCAAGTGCAATGGAGGATTCTTCAGCAGCTGTATCCATCACTATCTCCCAATCTGCTCATGAGAACAAGGATGTGAAAACTATCAACAACAAATACTGTCCAAGAAACGTGGATCCTCCACATACAATTCAACCATTTGAGTCAACTACATTATTATCTGCTTCAAGATTCAGTGCAGAAAGCAGTCATACTGATCACGATGACAGCGCCCTCTCTCCCTGCAGTGAAGGGAAGGGTTATTCAGGCAATTCATCTGAATTGGAGATTTCACATGTGGAGGCCAGAGAAAATGTCACTGTGCATTATGAAGAGAAAAAGTCTCAACGGCATGAGAAGCAAGTTCGACTTCCATCCAGGAAACCTGGAACCAATGTAAGAAAGAGGGTGAAAGGCATGGCCAAGGCAGAAAGCTATTGA 1458 0.417 MEKVCEFCTDLRPLVYCKADAAYLCLPCDAKVHLANALSGRHLRTLVCNSCRYHLAYVQCLDHKILICHDCDQKLHNMSLTHHKRAIRSFMGSPSAKDYATLWGFGLNEIENCASQDLFASISCVSADSNVVQVSGQPGKVSEAKLHGGSISQQGQILYSDQERQTILKQIIDLKRLQLNEESDQSMEIKELQETGLSSSAYHTIRKLDEKSNQQEQNSQVHATNIAEKDSPTVKLNPESLSSTFSQLDNLSSSIVDLPLHGELFWTCKSPLRSNQLWSQNIQDLGICEELVCRDDFNIPDVDLTFQNFEEIFGGDQDPVRVMLADKDASCSSLEKDMSVDKSDIDNPSAMEDSSAAVSITISQSAHENKDVKTINNKYCPRNVDPPHTIQPFESTTLLSASRFSAESSHTDHDDSALSPCSEGKGYSGNSSELEISHVEARENVTVHYEEKKSQRHEKQVRLPSRKPGTNVRKRVKGMAKAESY* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0131 485 CDD Bbox1_BBX-like 4 47 - -
Dod06g0131 485 MobiDBLite consensus disorder prediction 210 234 - -
Dod06g0131 485 MobiDBLite consensus disorder prediction 436 464 - -
Dod06g0131 485 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 428 - -
Dod06g0131 485 MobiDBLite consensus disorder prediction 214 234 - -
Dod06g0131 485 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 428 - -
Dod06g0131 485 MobiDBLite consensus disorder prediction 404 485 - -
Dod06g0131 485 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Dod06g0131 485 SMART bboxneu5 48 87 IPR000315 GO:0008270
Dod06g0131 485 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0131 Dod-Chr6 1800530 1805797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0131 1 348 C2C2-CO-like Transcription Factor Family AT1G68190 38.375 8.24e-64 209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0131 06 1800530 1805797 Dod06g0131 06 1800530 1805797 ECH