Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0127 ATGTCTCAGAACGGTTCCTTCCCCCGTTTCACCTATCAGCAACAGCTGCAGCTGCTTCAGCACCAGCAGGTGCTTCTGCAGCAGCAACAGCACCTGCAGCAGCGTCGCCTTCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGTCTCACGTGTCCGACATCATCGGAAATGGGCATGTTGTTGTCGGGGGGCAGAATCCAACGTTGCTGTCGCTGATGTCTGCTCCGACGAGGCTGCGTGCTAGTCCGAAACGCGACCACACGCCCGAGAACTACGAGGGGCTGCAATTGGGGTTCGACCCTCGCGTGTACAGCTCCCTTGAGCAGTACATGCCTCCGGACATGCTCGACAAGCCACGTGACTTTAAGGCTGACTACATGAACAACATTCTCGTCCGCTACTCTTCTGAGAGTGATCGCATTCGGATTCAGAAGCACCGGGAGTACAGGCAGAAAATCCTGTCGACTTATCCACCACTGAATAAGGAGATATATACCATGGATGCTGAAAACTTTTTTGTACCCTCGTTTCTCGGTGCGATCAGAGAAAATACAGAAGCTGGTTTCAGACGTATAATGGCTGAACCTGCTAAAGGAATATATACCTTTGAAATGTTTCAGCCAGAGTTTTGTGACATGCTGGTGTCTGAGGTGGATCATTTTGAAAGATGGGTCCATGACACTAAATTCAAAATCATGCGACCTAGCACAATGAATAAATTTGGTGTTGTGCTTGATGATTTTGGCATGCAAAACATGCTGGAGAAATTGATGAATGAATTCATACGACCCTTATCTCGAGTTTTCTTTGCTGAATTTGGTGGATGCACTCTAGACTCTCATCATGGTTATGTTGTTGAATATGGGATCCACAGGGATCGAGAACTTGGCTTCCATGTGGACGACGCGGAAGTCACCTTAAACATTTGCTTGGGAAAAGAATTTACTGGTGGAGAACTGTTCTTCCGTGGTGTTCGATGTGAAGCCCATGTGAATACAGAATCCCAATTAGAGGAGATCTTTGATTACTCCCATGTTCCGGGACAGGCAGTTCTTCATTGTGGTCGTCACCGGCATGGTGCTAAACCAACAACATCTGGGAAGCGGATGAATTTAATTCTCTGGTGTAGGAGCTCCACATTTAGGGAGATTATCAAGTATCAGAGAGAGTTTCCTAGTTGGTGTGGAGAATGCAAGCGCAAGAAGAAGGAGAGAGAGCGTTTAGCAATTGCTGCGACCAAACAGTTGATTTCTGAGGATGTCAACTTCACATGTGGAAACACCCAAGACCTTTCTTTCTGGTCTGAAGTCGAGGATGACTGGGTGCAACGACATAGGTGGAATGTGCAGCAGCATGCGATACAAAAAGAAATGCTTAGGCAAAGGAGCTGA 1395 0.4774 MSQNGSFPRFTYQQQLQLLQHQQVLLQQQQHLQQRRLQQQQQQQQQQQQSHVSDIIGNGHVVVGGQNPTLLSLMSAPTRLRASPKRDHTPENYEGLQLGFDPRVYSSLEQYMPPDMLDKPRDFKADYMNNILVRYSSESDRIRIQKHREYRQKILSTYPPLNKEIYTMDAENFFVPSFLGAIRENTEAGFRRIMAEPAKGIYTFEMFQPEFCDMLVSEVDHFERWVHDTKFKIMRPSTMNKFGVVLDDFGMQNMLEKLMNEFIRPLSRVFFAEFGGCTLDSHHGYVVEYGIHRDRELGFHVDDAEVTLNICLGKEFTGGELFFRGVRCEAHVNTESQLEEIFDYSHVPGQAVLHCGRHRHGAKPTTSGKRMNLILWCRSSTFREIIKYQREFPSWCGECKRKKKERERLAIAATKQLISEDVNFTCGNTQDLSFWSEVEDDWVQRHRWNVQQHAIQKEMLRQRS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0127 464 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 278 379 IPR005123 -
Dod06g0127 464 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 54 419 - -
Dod06g0127 464 SMART p4hc 199 378 IPR006620 GO:0005506|GO:0016705|GO:0031418
Dod06g0127 464 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 54 419 - -
Dod06g0127 464 Gene3D q2cbj1_9rhob like domain 198 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0127 Dod-Chr6 1708581 1715537 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0127 06 1708581 1715537 Dod06g0127 06 1708581 1715537 ECH