Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0116 ATGAATGCCTTGAGCCCCAGCCTAGTCCTCTCTTTGACCATGGAAAGAGAAGGAAAATCTTTTCTTGGGACTCCACTGTGTTCAACTCCAAACCAAGATAGAAACCAAGAAATGGATGCTCAGACACCTGGACAACGTTGTTGCCGCAGAGAAGATATTGTTGAGGAAGCTAAGAAGCAACTATGGTTAGCAGGGCCACTTATTGCGGTTAGTCTGCTGCAATATAGCTTACAAATGATATCTATCATGTTTGTCGGCCATCTTGGCAATTTGCCTCTTTCTGGTGCTTCCTTGGGCACCTCCTTCGCCTCAGTCACTGGTTACAGCGTTCTGTTAGGAATGGGGAGTGCATTGGAGACGTTATGTGGCCAAGCCTATGGAGCCAAGCAGTATCACATGCTAGGAATTCACACACAAAGGGCAATGCTTGTCCTTCTAGGATTGAGCATTCCCTTATCATTAATATGGTTTTACACAAGCAACCTTCTCACTGTAATGGGCCAAGACCGCGAGATAGCAGCAGAAGCAGGAATATATAATCGGTGGATGATCCCTGGCCTTTTCGCCTATGGCCTCCTTCAATGCCTCAACAGATTTCTACAGACCCAAAACAACGTTTTTCCAATGCTGATAAGCTCTGGGATAACAACTTTGGTGCATATTGTATTTTGTTGGCTCTTTGTCTATGAATGTGAATTAGGAAGCAAAGGAGCGGCTTTAGCAATCAGCATCTCCTATTGGGTTAATGTGTTCCAGTTGGTAATTTACGTAAATTTAGCCGGAGCTTGTGCATCAACATGGAATGGGGTTTACAAAGAGGCCTTGAATGATATTCTCAGTTTTATAAAACTGGCAGTTGCCTCTGCAGTTATGATATGTTTTGAGTATTGGTCCTTTGAGATGGTTGTTCTTCTCTCAGGTCTTCTTCCAAACCCACAACTAGAGACATCTGTTTTATCAATAAGCCTCAATACATGTTGGATGGTCTATATGATCTCTGTTGGTCTTGGTGGTGCCATAAGCACCCGCGTGTCAAATGAAATGGGAGCTGGGAACGCACAAGGTGCACTTTTAGCTCTTCGTGTCATGACTGCAATTGCCATATTAGAGGGTACAACAGTAGCATTGGTTACCATTTTGGTGAGGAATATTTGGGGAAAGCTCTACAGCAATGAAGATGAAGTTATAAAATGTGTGGCCAAGATGATGCTTCTACTGGCACTTTCTGACTTCCTGGATGGTTTCCAGTGTGTTCTTTCAGGAGCTGCTAGAGGTTGTGGTTGGCAAAATCTATGTGCCTTTATAAACCTCGGTGCTTACTATGTTGTGGGAATTCCTTCTGCTATCCTGTTTGCATTTATCTTCCATATTGGAGGGATGGGGCTGTGGATGGGAATCATATGTGCACTTTCTGTTCAAGGGATAGCACTAGTTACAGTAATTGCATGTACAGATTGGAATAAAGAGGCAAGGAAGGCAGTTAGCTCACACTACTCAGAAAACGTAGTTACAGAACCGCAGATTAACAATTAA 1533 0.4338 MNALSPSLVLSLTMEREGKSFLGTPLCSTPNQDRNQEMDAQTPGQRCCRREDIVEEAKKQLWLAGPLIAVSLLQYSLQMISIMFVGHLGNLPLSGASLGTSFASVTGYSVLLGMGSALETLCGQAYGAKQYHMLGIHTQRAMLVLLGLSIPLSLIWFYTSNLLTVMGQDREIAAEAGIYNRWMIPGLFAYGLLQCLNRFLQTQNNVFPMLISSGITTLVHIVFCWLFVYECELGSKGAALAISISYWVNVFQLVIYVNLAGACASTWNGVYKEALNDILSFIKLAVASAVMICFEYWSFEMVVLLSGLLPNPQLETSVLSISLNTCWMVYMISVGLGGAISTRVSNEMGAGNAQGALLALRVMTAIAILEGTTVALVTILVRNIWGKLYSNEDEVIKCVAKMMLLLALSDFLDGFQCVLSGAARGCGWQNLCAFINLGAYYVVGIPSAILFAFIFHIGGMGLWMGIICALSVQGIALVTVIACTDWNKEARKAVSSHYSENVVTEPQINN* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0116 510 PANTHER PROTEIN DETOXIFICATION 35 496 - -
Dod06g0116 510 MobiDBLite consensus disorder prediction 23 43 - -
Dod06g0116 510 PANTHER MULTIDRUG RESISTANCE PROTEIN 35 496 - -
Dod06g0116 510 MobiDBLite consensus disorder prediction 24 42 - -
Dod06g0116 510 TIGRFAM matE: MATE efflux family protein 66 463 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod06g0116 510 CDD MATE_eukaryotic 56 492 IPR045069 GO:0042910|GO:1990961
Dod06g0116 510 Pfam MatE 288 449 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod06g0116 510 Pfam MatE 66 226 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0116 Dod-Chr6 1504152 1520356 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0116 06 1504152 1520356 Dod06g0116 06 1504152 1520356 ECH