Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0105 ATGAGCAACAACAGAGGAGGAGGAGGAGGAGAAGAAGAAGAACCGTTCTCGAAAGCTGCAAGAGCCACAGAAGATCTGTACAATGTCCGCGACACTTATTTCCCACCGAACCCTGACGACAGAGCCTCCAAGCTCCGGCACCATTCCGATATCGCTCTCTCCCTCCTCGATTCCATGCCCCAAGAACAAAGGAAATCGCCTATGCAACGTGCAACATTTGAATACCTAAAAGGGAAGATATTAGATGTATTCCCTGATTATAGGAAAGAAGCTGAGGATCATCTGTCAAAAGCTGTTAAGCTAAACCCGTCTCTTGCAGATGCTTGGCTATGCTTAGGTAACTGCATTTGGAAGAAAGGGGATTTATCTGCTGCAAAGAACTGCCTCAGTCTTGCATTGAACAAGGGTCCTGACAAAAGAATTCTTTGTGAATTATCAATGCTTAAAAGAAGAATGTCTCAAGGTGCAGAGAATCAAGCGGAACTTGTTGAGGAAAGCATTCAACATGCCAAGGAAGCAATCACTTTGGATGTCAAGGATGGCAACTCTTGGTATAATCTTGGAAATGCATGCCTTACAAGTTTTTTTGTCACTGGAGCTTGGGATCATAGCAAACTTTTACATTCTTTGAAAGCATATCAAAATGCTGAGAAAGATGAAAGAATGAAGTCCAATCCGGATTTATATTTTAACAGTGCCACTGTTAACAAATATCTAGAGAACTACCAGAGGGCTCTTAGCGGATTTGAGGCTGCTGCTCTAAAGGATCCAGGTCTCAATGCTGCAGAGGAGGTTCAGAAGATAGTCAATTTACTTGACAAGGTGGACAATCTTTTGAGGGGACATGTACGTGCCAAGCGAGTGGCATCCTTGGCATCATCACTGGCTGCTGTTAATTTGAATTCATCATACAAAAAAATTACCATAGACCTTTTGTCAGAGGGTCTGAATAGAGCTCTAGCCGTAGAGGGGAAGGTGCTTTTCTTTGTTAGGAGTGAGAGTGTTTCTCCCCTATACTATTTGCTTTGTGATTCAAATCAAAATTGCTTCGTTCTCACAGTTTATGGTGTACGTAATGATGCGATCAAAGAAGGAGATCAGCTAACTCTTCTTGACCCTTGTTTTCATAATGTTGACTTTTCCTGGAAGGACAAGCATTACCAGTTCAAATCGATACGCCTGGATTTCTATGAACAAGTGCTTGTAAATGGAAAAGCTCTGACTCCTCAGCATGCTGTTCGTACATCAATATATGCACAACATAAACCCTCCTGA 1275 0.4235 MSNNRGGGGGEEEEPFSKAARATEDLYNVRDTYFPPNPDDRASKLRHHSDIALSLLDSMPQEQRKSPMQRATFEYLKGKILDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSAAKNCLSLALNKGPDKRILCELSMLKRRMSQGAENQAELVEESIQHAKEAITLDVKDGNSWYNLGNACLTSFFVTGAWDHSKLLHSLKAYQNAEKDERMKSNPDLYFNSATVNKYLENYQRALSGFEAAALKDPGLNAAEEVQKIVNLLDKVDNLLRGHVRAKRVASLASSLAAVNLNSSYKKITIDLLSEGLNRALAVEGKVLFFVRSESVSPLYYLLCDSNQNCFVLTVYGVRNDAIKEGDQLTLLDPCFHNVDFSWKDKHYQFKSIRLDFYEQVLVNGKALTPQHAVRTSIYAQHKPS* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0105 424 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 14 347 - -
Dod06g0105 424 Gene3D Tetratricopeptide repeat domain 10 282 IPR011990 GO:0005515
Dod06g0105 424 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 14 347 - -
Dod06g0105 424 MobiDBLite consensus disorder prediction 1 21 - -
Dod06g0105 424 SMART tpr_5 106 139 IPR019734 GO:0005515
Dod06g0105 424 SMART tpr_5 226 259 IPR019734 GO:0005515
Dod06g0105 424 Pfam Tetratricopeptide repeat protein 5 OB fold domain 304 415 IPR032076 -
Dod06g0105 424 Coils Coil 153 173 - -
Dod06g0105 424 Gene3D - 283 423 IPR038645 -
Dod06g0105 424 SUPERFAMILY TPR-like 75 250 IPR011990 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0105 06 1388240 1393451 Dod06g0105 06 1388240 1393451 ECH