Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0087 ATGGTGGGTATTGGCGGGAAAAAGGTGCGCCAAATGGTCGTTGGCTTCGGCGGCAGCGGCCTCGGCCAGCTCGTCGCCGCCGTCGCCGTCTCCTTCCTCGTCCGCCTATTCTCCTCTCCCGGCCCCGTTCTCTCGCCGGACGACGATTATGACGACGACGGTGTGCCGGAGAACGGCATCCACGACGCCGAAGCTCCGCCTCAGTCCGGCAAGGTCACGCCGGTCACAATCCGCTGGAGCAACATCAATTGCTCCATTTCTGATAAATCCTCCAAGTCCGTGAGGTTTTTGCTGAAAAATGTGACTGGAGAAGCAAAACCTGGAAGGTTATTAGCTATAATGGGCCCTTCGGGATCGGGGAAGACAACTTTGCTAAATGTTCTTGCGGGTCAGTTGGCAGCATCGCCTCGGTTGCATTTGTCTGGCCTTTTGGAGTTCAATGGGAAGCCTAGTTCAAAGAACCCTTACAAGTTTGCTTATGTTAGACAGGAGGATCTATTTTTCTCTCAGCTCACTGTGCGGGAAACATTGTCTCTTGCTACAGAACTCCAGCTTCCCCACATTTCTTCTGCAGAAGAGAGAGATGAATACGTAAACAATCTCCTTTTCAAACTAGGCTTGGTTAGCTGTGCTGATACCAATGTTGGTGACGCAAAAGTTCGTGGAATTAGTGGTGGCGAAAAGAAACGATTATCCTTGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCTTTCCAGGCGGAGAAAGTCATGGAAACTCTCCAACAACTTGCACAAGATGGTCATACTGTAATTTGCTCTATACATCAGCCAAGAGGTTCAGTGTACAATAAATTTGACGACATTGTCTTGCTTACGGAGGGTTCACTTGTTTATGCTGGCCCTGCTCGTGATGAACCATTGGCATACTTCTCAAAATTTGGGTACCATTGCCCAGATCATGTGAACCCTGCTGAATTCTTGGCTGATCTCATATCCGTAGATTACTGTTCTGCTGATAGTGTCTATTCCTCTCGAAAAAGGATTGATGGTCTTGTTGAGTCATTCTCACATATCCTATCTGCATCTGCAATAATATATGCAACTCCAATTGCTGTAGATGGGCTCTCAAAAAGTAGAAAGAAAATCAGCAAGACGGCTGTAGCAAAAAAGAAAGGAGGGTGGTGGAAGCAATTTTGGTTGCTTCTTAGGCGAGCATGGATGCAGGCTTCCCGTGATGCACCGACAAACAAAGTTCGAGCAAGGATGTCAATTGCGTCAGCAATTATCTTTGGGTCAGTTTTTTGGAGAATGGGAAAATCTCAAACTTCTATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAACACAGCTATGGCTGCTCTCACCAAGACCGTTGGTGTGTTTCCAAAGGAAAAGACAATTGTTGATAGAGAGCGTGCAAAAGGCTCCTATTCCTTAGGTCCCTATCTGTTTTCCAAATTGTTAGCTGAGGTTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTGCTGTTTTGTACCCCATGGCACGTCTTCATCCTACTTTGCTGAGATTTGGGAAATTCTGTGGAATTGTTACCATGGAATCTTTTGCTGCATCTGCAATGGGTCTCACTGTTGGTGCTATGGTCCCAACCACTGAAGCTGCAATGGCAGTAGGCCCATCTCTTATGACAGTTTTTATTGTATTTGGAGGCTACTATGTCAATCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTTTCACTGATTAGATGGGCGTTTCAGGGACTTTGCATCAATGAATTTAGTGGTCTTCAATTTGATCATCAGCATTCTTTTGATATCCAAACTGGTGAACAGGCACTAGAGCGAATTTCCTTTGGAAATAGTAGGATTAGGGATACGGTGGTAGCACAAAATAGAATACTGTTCTTTTGGTATTGCGCCACCTACCTTCTTCTTGAGAAAAACAAGCCTAAATACCAGCCACTTGAGATAATCCCTCTCGAACACAACAAACCGCATTTGAAACTTGAGGAGTTAAATTCTGAACAAGTTGATCAGACACTTGAATCTCCACCGGTCAACCAAGATGGATCCAACCAACCGCTTGAATCATCTGAAGTAGATCCTATTGGCCCTTTTATCCTAGAAGGTGCAAAGTAG 2196 0.4558 MVGIGGKKVRQMVVGFGGSGLGQLVAAVAVSFLVRLFSSPGPVLSPDDDYDDDGVPENGIHDAEAPPQSGKVTPVTIRWSNINCSISDKSSKSVRFLLKNVTGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGKPSSKNPYKFAYVRQEDLFFSQLTVRETLSLATELQLPHISSAEERDEYVNNLLFKLGLVSCADTNVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYNKFDDIVLLTEGSLVYAGPARDEPLAYFSKFGYHCPDHVNPAEFLADLISVDYCSADSVYSSRKRIDGLVESFSHILSASAIIYATPIAVDGLSKSRKKISKTAVAKKKGGWWKQFWLLLRRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKEKTIVDRERAKGSYSLGPYLFSKLLAEVPIGAAFPLMFGAVLYPMARLHPTLLRFGKFCGIVTMESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFSGLQFDHQHSFDIQTGEQALERISFGNSRIRDTVVAQNRILFFWYCATYLLLEKNKPKYQPLEIIPLEHNKPHLKLEELNSEQVDQTLESPPVNQDGSNQPLESSEVDPIGPFILEGAK* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0087 731 CDD ABCG_EPDR 74 305 - -
Dod06g0087 731 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 323 IPR003439 GO:0005524
Dod06g0087 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 1 680 - -
Dod06g0087 731 Pfam ABC transporter 98 250 IPR003439 GO:0005524
Dod06g0087 731 SMART AAA_5 107 300 IPR003593 -
Dod06g0087 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 309 IPR027417 -
Dod06g0087 731 ProSitePatterns ABC transporters family signature. 223 237 IPR017871 GO:0005524
Dod06g0087 731 MobiDBLite consensus disorder prediction 690 731 - -
Dod06g0087 731 Gene3D - 68 312 IPR027417 -
Dod06g0087 731 MobiDBLite consensus disorder prediction 695 717 - -
Dod06g0087 731 MobiDBLite consensus disorder prediction 44 71 - -
Dod06g0087 731 Pfam ABC-2 type transporter 280 336 IPR043926 GO:0140359
Dod06g0087 731 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 680 - -
Dod06g0087 731 Pfam ABC-2 type transporter 402 612 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0087 Dod-Chr6 1242011 1248873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0087 97 305 Calmodulin-binding Proteins AT2G36910 26.941 2.61e-10 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0087 06 1242011 1248873 Dod06g0087 06 1242011 1248873 ECH